Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
NKX2-2O95096 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-2O95096 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NKX2-2O95096 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX2-2O95096 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX2-2O95096 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-2O95096 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-2O95096 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-2O95096 AL512625.2-201ENST00000417533 625 ntBASIC18.83■□□□□ 0.6
NKX2-2O95096 AC026185.1-201ENST00000445748 174 ntBASIC18.83■□□□□ 0.6
NKX2-2O95096 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-2O95096 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-2O95096 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NKX2-2O95096 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-2O95096 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-2O95096 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.83■□□□□ 0.6
NKX2-2O95096 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-2O95096 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-2O95096 AL162377.1-201ENST00000618844 1793 ntBASIC18.83■□□□□ 0.6
NKX2-2O95096 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-2O95096 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-2O95096 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-2O95096 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-2O95096 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-2O95096 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-2O95096 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NKX2-2O95096 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.82■□□□□ 0.6
NKX2-2O95096 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-2O95096 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-2O95096 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.82■□□□□ 0.6
NKX2-2O95096 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.82■□□□□ 0.6
NKX2-2O95096 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-2O95096 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.82■□□□□ 0.6
NKX2-2O95096 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.82■□□□□ 0.6
NKX2-2O95096 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.82■□□□□ 0.6
NKX2-2O95096 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-2O95096 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.82■□□□□ 0.6
NKX2-2O95096 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-2O95096 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
NKX2-2O95096 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NKX2-2O95096 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 AL512408.1-201ENST00000569378 2000 ntBASIC18.81■□□□□ 0.6
NKX2-2O95096 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.81■□□□□ 0.6
NKX2-2O95096 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.81■□□□□ 0.6
NKX2-2O95096 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NKX2-2O95096 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.81■□□□□ 0.6
NKX2-2O95096 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 AC133552.2-202ENST00000575694 574 ntBASIC18.81■□□□□ 0.6
NKX2-2O95096 CYP2T3P-201ENST00000601990 817 ntBASIC18.81■□□□□ 0.6
NKX2-2O95096 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.81■□□□□ 0.6
NKX2-2O95096 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 AC010980.2-201ENST00000587099 1412 ntBASIC18.81■□□□□ 0.6
NKX2-2O95096 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NKX2-2O95096 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-2O95096 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.81■□□□□ 0.6
NKX2-2O95096 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.81■□□□□ 0.6
NKX2-2O95096 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.81■□□□□ 0.6
NKX2-2O95096 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.8■□□□□ 0.6
NKX2-2O95096 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-2O95096 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-2O95096 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-2O95096 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-2O95096 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-2O95096 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
NKX2-2O95096 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-2O95096 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-2O95096 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-2O95096 KRT18P68-201ENST00000392293 1000 ntBASIC18.8■□□□□ 0.6
NKX2-2O95096 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.8■□□□□ 0.6
NKX2-2O95096 AL050303.2-201ENST00000619798 666 ntBASIC18.8■□□□□ 0.6
NKX2-2O95096 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-2O95096 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-2O95096 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX2-2O95096 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-2O95096 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.8■□□□□ 0.6
NKX2-2O95096 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX2-2O95096 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX2-2O95096 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-2O95096 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.79■□□□□ 0.6
NKX2-2O95096 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-2O95096 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
NKX2-2O95096 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-2O95096 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.79■□□□□ 0.6
NKX2-2O95096 AC093787.1-201ENST00000450396 207 ntBASIC18.79■□□□□ 0.6
NKX2-2O95096 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NKX2-2O95096 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-2O95096 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.79■□□□□ 0.6
NKX2-2O95096 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms