Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.67■□□□□ 0.74
CNOT3O75175 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.67■□□□□ 0.74
CNOT3O75175 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.67■□□□□ 0.74
CNOT3O75175 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.67■□□□□ 0.74
CNOT3O75175 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.67■□□□□ 0.74
CNOT3O75175 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT3O75175 MKRN4P-201ENST00000444706 1521 ntBASIC19.66■□□□□ 0.74
CNOT3O75175 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT3O75175 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.66■□□□□ 0.74
CNOT3O75175 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.66■□□□□ 0.74
CNOT3O75175 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT3O75175 ABHD17AP1-201ENST00000358206 933 ntBASIC19.66■□□□□ 0.74
CNOT3O75175 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT3O75175 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT3O75175 MIPEPP3-201ENST00000412105 444 ntBASIC19.66■□□□□ 0.74
CNOT3O75175 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT3O75175 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT3O75175 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.66■□□□□ 0.74
CNOT3O75175 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.66■□□□□ 0.74
CNOT3O75175 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.66■□□□□ 0.74
CNOT3O75175 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CNOT3O75175 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.66■□□□□ 0.74
CNOT3O75175 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT3O75175 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CNOT3O75175 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT3O75175 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT3O75175 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT3O75175 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT3O75175 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT3O75175 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CNOT3O75175 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT3O75175 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT3O75175 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.65■□□□□ 0.74
CNOT3O75175 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.65■□□□□ 0.74
CNOT3O75175 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.65■□□□□ 0.74
CNOT3O75175 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CNOT3O75175 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.65■□□□□ 0.74
CNOT3O75175 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CNOT3O75175 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.65■□□□□ 0.74
CNOT3O75175 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CNOT3O75175 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.65■□□□□ 0.74
CNOT3O75175 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CNOT3O75175 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.65■□□□□ 0.74
CNOT3O75175 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT3O75175 KRT18P6-201ENST00000555540 1265 ntBASIC19.65■□□□□ 0.74
CNOT3O75175 AL591742.1-201ENST00000604433 565 ntBASIC19.65■□□□□ 0.74
CNOT3O75175 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT3O75175 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CNOT3O75175 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT3O75175 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT3O75175 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT3O75175 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.65■□□□□ 0.74
CNOT3O75175 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT3O75175 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT3O75175 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT3O75175 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CNOT3O75175 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNOT3O75175 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.64■□□□□ 0.74
CNOT3O75175 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CNOT3O75175 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNOT3O75175 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNOT3O75175 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNOT3O75175 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNOT3O75175 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.64■□□□□ 0.73
CNOT3O75175 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNOT3O75175 AL512625.2-201ENST00000417533 625 ntBASIC19.64■□□□□ 0.73
CNOT3O75175 AC073210.2-201ENST00000430369 194 ntBASIC19.64■□□□□ 0.73
CNOT3O75175 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CNOT3O75175 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.64■□□□□ 0.73
CNOT3O75175 AC069236.1-201ENST00000604339 616 ntBASIC19.64■□□□□ 0.73
CNOT3O75175 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNOT3O75175 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CNOT3O75175 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNOT3O75175 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT3O75175 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT3O75175 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.63■□□□□ 0.73
CNOT3O75175 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT3O75175 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.63■□□□□ 0.73
CNOT3O75175 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT3O75175 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT3O75175 AC091799.1-201ENST00000422823 811 ntBASIC19.63■□□□□ 0.73
CNOT3O75175 CD99P1-205ENST00000527459 561 ntBASIC19.63■□□□□ 0.73
CNOT3O75175 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.63■□□□□ 0.73
CNOT3O75175 AL162412.1-201ENST00000567129 965 ntBASIC19.63■□□□□ 0.73
CNOT3O75175 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.63■□□□□ 0.73
CNOT3O75175 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.63■□□□□ 0.73
CNOT3O75175 AC008694.1-202ENST00000636953 945 ntBASIC19.63■□□□□ 0.73
CNOT3O75175 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.63■□□□□ 0.73
CNOT3O75175 AC133041.1-202ENST00000642053 222 ntBASIC19.63■□□□□ 0.73
CNOT3O75175 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT3O75175 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT3O75175 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT3O75175 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT3O75175 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT3O75175 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT3O75175 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CNOT3O75175 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms