Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA12O60330 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PCDHGA12O60330 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.19■□□□□ 0.82
PCDHGA12O60330 CYP21A1P-202ENST00000354927 1481 ntBASIC20.19■□□□□ 0.82
PCDHGA12O60330 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGA12O60330 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGA12O60330 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA12O60330 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGA12O60330 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGA12O60330 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA12O60330 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGA12O60330 POM121L13P-201ENST00000422362 380 ntBASIC20.19■□□□□ 0.82
PCDHGA12O60330 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGA12O60330 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PCDHGA12O60330 AC233263.1-201ENST00000578059 224 ntBASIC20.19■□□□□ 0.82
PCDHGA12O60330 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGA12O60330 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDHGA12O60330 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA12O60330 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGA12O60330 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGA12O60330 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA12O60330 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA12O60330 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGA12O60330 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGA12O60330 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA12O60330 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGA12O60330 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA12O60330 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA12O60330 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA12O60330 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDHGA12O60330 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA12O60330 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA12O60330 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA12O60330 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGA12O60330 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGA12O60330 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGA12O60330 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGA12O60330 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHGA12O60330 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGA12O60330 AC105020.6-201ENST00000621523 1217 ntBASIC20.17■□□□□ 0.82
PCDHGA12O60330 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGA12O60330 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGA12O60330 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA12O60330 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGA12O60330 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PCDHGA12O60330 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA12O60330 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA12O60330 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA12O60330 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA12O60330 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA12O60330 FAM99A-202ENST00000538190 1989 ntBASIC20.16■□□□□ 0.82
PCDHGA12O60330 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA12O60330 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA12O60330 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.16■□□□□ 0.82
PCDHGA12O60330 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
PCDHGA12O60330 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGA12O60330 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA12O60330 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA12O60330 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA12O60330 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA12O60330 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PCDHGA12O60330 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA12O60330 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PCDHGA12O60330 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGA12O60330 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGA12O60330 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA12O60330 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
PCDHGA12O60330 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA12O60330 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.15■□□□□ 0.82
PCDHGA12O60330 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA12O60330 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.15■□□□□ 0.82
PCDHGA12O60330 SNORA78-201ENST00000459373 127 ntBASIC20.15■□□□□ 0.82
PCDHGA12O60330 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGA12O60330 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGA12O60330 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA12O60330 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA12O60330 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGA12O60330 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA12O60330 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGA12O60330 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA12O60330 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA12O60330 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA12O60330 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA12O60330 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHGA12O60330 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms