Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.72■■□□□ 1.07
O00370 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
O00370 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
O00370 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
O00370 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
O00370 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
O00370 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
O00370 AC007225.1-201ENST00000566331 1836 ntBASIC21.71■■□□□ 1.07
O00370 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
O00370 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
O00370 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.71■■□□□ 1.07
O00370 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
O00370 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
O00370 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.71■■□□□ 1.07
O00370 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.71■■□□□ 1.07
O00370 NCF1B-203ENST00000435988 1254 ntBASIC21.71■■□□□ 1.07
O00370 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.71■■□□□ 1.07
O00370 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.71■■□□□ 1.07
O00370 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
O00370 MIR2861-201ENST00000636310 90 ntBASIC21.71■■□□□ 1.07
O00370 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
O00370 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
O00370 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
O00370 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.71■■□□□ 1.07
O00370 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
O00370 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.71■■□□□ 1.07
O00370 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
O00370 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
O00370 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
O00370 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
O00370 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
O00370 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
O00370 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
O00370 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.7■■□□□ 1.06
O00370 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
O00370 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.7■■□□□ 1.06
O00370 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
O00370 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
O00370 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.7■■□□□ 1.06
O00370 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
O00370 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.7■■□□□ 1.06
O00370 AF201337.1-201ENST00000520239 748 ntBASIC21.7■■□□□ 1.06
O00370 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.7■■□□□ 1.06
O00370 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.7■■□□□ 1.06
O00370 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
O00370 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
O00370 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
O00370 AC010980.2-201ENST00000587099 1412 ntBASIC21.7■■□□□ 1.06
O00370 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
O00370 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
O00370 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
O00370 FP700111.2-201ENST00000619190 1892 ntBASIC21.69■■□□□ 1.06
O00370 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
O00370 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
O00370 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
O00370 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
O00370 MCRIP2P1-201ENST00000394346 511 ntBASIC21.69■■□□□ 1.06
O00370 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.69■■□□□ 1.06
O00370 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.69■■□□□ 1.06
O00370 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.69■■□□□ 1.06
O00370 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
O00370 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.69■■□□□ 1.06
O00370 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.69■■□□□ 1.06
O00370 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
O00370 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
O00370 AC105036.2-201ENST00000569468 176 ntBASIC21.69■■□□□ 1.06
O00370 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.69■■□□□ 1.06
O00370 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.69■■□□□ 1.06
O00370 AL121832.2-201ENST00000610979 668 ntBASIC21.69■■□□□ 1.06
O00370 AC087633.2-202ENST00000565166 1439 ntBASIC21.69■■□□□ 1.06
O00370 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
O00370 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.69■■□□□ 1.06
O00370 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
O00370 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
O00370 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
O00370 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.69■■□□□ 1.06
O00370 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
O00370 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
O00370 AC083906.2-201ENST00000511578 360 ntBASIC21.68■■□□□ 1.06
O00370 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.68■■□□□ 1.06
O00370 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
O00370 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.68■■□□□ 1.06
O00370 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.68■■□□□ 1.06
O00370 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.68■■□□□ 1.06
O00370 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
O00370 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.68■■□□□ 1.06
O00370 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
O00370 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
O00370 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
O00370 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
O00370 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
O00370 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
O00370 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
O00370 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
O00370 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
O00370 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
O00370 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
O00370 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
O00370 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
O00370 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms