Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
DFFAO00273 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DFFAO00273 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.93■□□□□ 0.94
DFFAO00273 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DFFAO00273 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.93■□□□□ 0.94
DFFAO00273 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.93■□□□□ 0.94
DFFAO00273 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.93■□□□□ 0.94
DFFAO00273 AC105036.2-201ENST00000569468 176 ntBASIC20.93■□□□□ 0.94
DFFAO00273 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
DFFAO00273 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
DFFAO00273 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DFFAO00273 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DFFAO00273 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
DFFAO00273 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DFFAO00273 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DFFAO00273 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DFFAO00273 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DFFAO00273 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.92■□□□□ 0.94
DFFAO00273 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DFFAO00273 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DFFAO00273 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DFFAO00273 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.92■□□□□ 0.94
DFFAO00273 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.92■□□□□ 0.94
DFFAO00273 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.92■□□□□ 0.94
DFFAO00273 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DFFAO00273 MCRIP2P1-201ENST00000394346 511 ntBASIC20.92■□□□□ 0.94
DFFAO00273 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.92■□□□□ 0.94
DFFAO00273 AL355472.2-201ENST00000422958 438 ntBASIC20.92■□□□□ 0.94
DFFAO00273 AF201337.1-201ENST00000520239 748 ntBASIC20.92■□□□□ 0.94
DFFAO00273 AC133552.2-202ENST00000575694 574 ntBASIC20.92■□□□□ 0.94
DFFAO00273 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.92■□□□□ 0.94
DFFAO00273 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.92■□□□□ 0.94
DFFAO00273 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DFFAO00273 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DFFAO00273 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.92■□□□□ 0.94
DFFAO00273 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DFFAO00273 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.92■□□□□ 0.94
DFFAO00273 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.92■□□□□ 0.94
DFFAO00273 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DFFAO00273 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DFFAO00273 FEM1AP1-201ENST00000431297 1995 ntBASIC20.92■□□□□ 0.94
DFFAO00273 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.92■□□□□ 0.94
DFFAO00273 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DFFAO00273 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DFFAO00273 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.92■□□□□ 0.94
DFFAO00273 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
DFFAO00273 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.91■□□□□ 0.94
DFFAO00273 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DFFAO00273 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DFFAO00273 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
DFFAO00273 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DFFAO00273 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.91■□□□□ 0.94
DFFAO00273 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.91■□□□□ 0.94
DFFAO00273 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.91■□□□□ 0.94
DFFAO00273 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DFFAO00273 AC087633.2-202ENST00000565166 1439 ntBASIC20.91■□□□□ 0.94
DFFAO00273 AC010980.2-201ENST00000587099 1412 ntBASIC20.91■□□□□ 0.94
DFFAO00273 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
DFFAO00273 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DFFAO00273 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DFFAO00273 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DFFAO00273 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DFFAO00273 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DFFAO00273 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
DFFAO00273 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.9■□□□□ 0.94
DFFAO00273 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
DFFAO00273 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
DFFAO00273 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DFFAO00273 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
DFFAO00273 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DFFAO00273 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DFFAO00273 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.9■□□□□ 0.94
DFFAO00273 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.9■□□□□ 0.94
DFFAO00273 PGM5P4-201ENST00000421970 445 ntBASIC20.9■□□□□ 0.94
DFFAO00273 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.9■□□□□ 0.94
DFFAO00273 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.9■□□□□ 0.94
DFFAO00273 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.9■□□□□ 0.94
DFFAO00273 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.9■□□□□ 0.94
DFFAO00273 AC100791.3-201ENST00000617619 330 ntBASIC20.9■□□□□ 0.94
DFFAO00273 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.9■□□□□ 0.94
DFFAO00273 AC073314.1-201ENST00000568729 2216 ntBASIC20.9■□□□□ 0.94
DFFAO00273 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
DFFAO00273 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DFFAO00273 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DFFAO00273 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
DFFAO00273 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
DFFAO00273 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
DFFAO00273 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.89■□□□□ 0.94
DFFAO00273 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DFFAO00273 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
DFFAO00273 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DFFAO00273 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.89■□□□□ 0.93
DFFAO00273 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DFFAO00273 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DFFAO00273 AL512625.2-201ENST00000417533 625 ntBASIC20.89■□□□□ 0.93
DFFAO00273 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.89■□□□□ 0.93
DFFAO00273 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.89■□□□□ 0.93
DFFAO00273 AC083906.2-201ENST00000511578 360 ntBASIC20.89■□□□□ 0.93
DFFAO00273 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.89■□□□□ 0.93
DFFAO00273 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms