Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF223E7ERA6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF223E7ERA6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF223E7ERA6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF223E7ERA6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF223E7ERA6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF223E7ERA6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF223E7ERA6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF223E7ERA6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF223E7ERA6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF223E7ERA6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF223E7ERA6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RNF223E7ERA6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RNF223E7ERA6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.96■□□□□ 0.3
RNF223E7ERA6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
RNF223E7ERA6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RNF223E7ERA6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF223E7ERA6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RNF223E7ERA6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF223E7ERA6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RNF223E7ERA6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.95■□□□□ 0.3
RNF223E7ERA6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF223E7ERA6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF223E7ERA6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF223E7ERA6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF223E7ERA6 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF223E7ERA6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF223E7ERA6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.95■□□□□ 0.3
RNF223E7ERA6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.95■□□□□ 0.3
RNF223E7ERA6 AL356652.1-201ENST00000615962 565 ntBASIC16.95■□□□□ 0.3
RNF223E7ERA6 AC097493.4-201ENST00000641197 219 ntBASIC16.95■□□□□ 0.3
RNF223E7ERA6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF223E7ERA6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF223E7ERA6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF223E7ERA6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF223E7ERA6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF223E7ERA6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF223E7ERA6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF223E7ERA6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RNF223E7ERA6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF223E7ERA6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF223E7ERA6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF223E7ERA6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RNF223E7ERA6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF223E7ERA6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF223E7ERA6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF223E7ERA6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RNF223E7ERA6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF223E7ERA6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF223E7ERA6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RNF223E7ERA6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.94■□□□□ 0.3
RNF223E7ERA6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF223E7ERA6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RNF223E7ERA6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF223E7ERA6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF223E7ERA6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF223E7ERA6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF223E7ERA6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF223E7ERA6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.94■□□□□ 0.3
RNF223E7ERA6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF223E7ERA6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF223E7ERA6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RNF223E7ERA6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 AC026471.5-201ENST00000615068 467 ntBASIC16.93■□□□□ 0.3
RNF223E7ERA6 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF223E7ERA6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF223E7ERA6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF223E7ERA6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF223E7ERA6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RNF223E7ERA6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF223E7ERA6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF223E7ERA6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF223E7ERA6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF223E7ERA6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RNF223E7ERA6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF223E7ERA6 TMPOP1-202ENST00000424642 1267 ntBASIC16.92■□□□□ 0.3
RNF223E7ERA6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF223E7ERA6 AC012306.2-201ENST00000609350 630 ntBASIC16.92■□□□□ 0.3
RNF223E7ERA6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF223E7ERA6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF223E7ERA6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF223E7ERA6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF223E7ERA6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF223E7ERA6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF223E7ERA6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms