Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC01548A6NM66 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01548A6NM66 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC01548A6NM66 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01548A6NM66 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01548A6NM66 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC01548A6NM66 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC01548A6NM66 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01548A6NM66 AC073210.2-201ENST00000430369 194 ntBASIC16.09■□□□□ 0.17
LINC01548A6NM66 AC091874.3-201ENST00000512672 1195 ntBASIC16.09■□□□□ 0.17
LINC01548A6NM66 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC01548A6NM66 AL589743.5-201ENST00000616611 1050 ntBASIC16.09■□□□□ 0.17
LINC01548A6NM66 AC007225.1-201ENST00000566331 1836 ntBASIC16.09■□□□□ 0.17
LINC01548A6NM66 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LINC01548A6NM66 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC01548A6NM66 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC01548A6NM66 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01548A6NM66 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01548A6NM66 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01548A6NM66 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC01548A6NM66 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01548A6NM66 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01548A6NM66 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC01548A6NM66 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
LINC01548A6NM66 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LINC01548A6NM66 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC01548A6NM66 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
LINC01548A6NM66 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01548A6NM66 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01548A6NM66 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
LINC01548A6NM66 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01548A6NM66 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.08■□□□□ 0.16
LINC01548A6NM66 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.08■□□□□ 0.16
LINC01548A6NM66 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01548A6NM66 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.08■□□□□ 0.16
LINC01548A6NM66 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.08■□□□□ 0.16
LINC01548A6NM66 AC105020.6-201ENST00000621523 1217 ntBASIC16.08■□□□□ 0.16
LINC01548A6NM66 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
LINC01548A6NM66 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01548A6NM66 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01548A6NM66 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01548A6NM66 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.08■□□□□ 0.16
LINC01548A6NM66 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01548A6NM66 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01548A6NM66 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01548A6NM66 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01548A6NM66 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LINC01548A6NM66 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.07■□□□□ 0.16
LINC01548A6NM66 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01548A6NM66 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01548A6NM66 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.07■□□□□ 0.16
LINC01548A6NM66 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01548A6NM66 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01548A6NM66 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.07■□□□□ 0.16
LINC01548A6NM66 AC097658.1-201ENST00000475555 843 ntBASIC16.07■□□□□ 0.16
LINC01548A6NM66 AC083880.1-201ENST00000608266 535 ntBASIC16.07■□□□□ 0.16
LINC01548A6NM66 MYC-209ENST00000641252 345 ntBASIC16.07■□□□□ 0.16
LINC01548A6NM66 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LINC01548A6NM66 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.07■□□□□ 0.16
LINC01548A6NM66 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01548A6NM66 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01548A6NM66 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.07■□□□□ 0.16
LINC01548A6NM66 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.07■□□□□ 0.16
LINC01548A6NM66 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.07■□□□□ 0.16
LINC01548A6NM66 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01548A6NM66 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01548A6NM66 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
LINC01548A6NM66 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01548A6NM66 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC01548A6NM66 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LINC01548A6NM66 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 KRT8P36-201ENST00000489121 1440 ntBASIC16.06■□□□□ 0.16
LINC01548A6NM66 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LINC01548A6NM66 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC01548A6NM66 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC01548A6NM66 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.06■□□□□ 0.16
LINC01548A6NM66 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.06■□□□□ 0.16
LINC01548A6NM66 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.06■□□□□ 0.16
LINC01548A6NM66 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
LINC01548A6NM66 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC01548A6NM66 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC01548A6NM66 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LINC01548A6NM66 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms