Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TBC1D3FA6NER0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TBC1D3FA6NER0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TBC1D3FA6NER0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TBC1D3FA6NER0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.33■□□□□ 0.85
TBC1D3FA6NER0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TBC1D3FA6NER0 POM121L13P-201ENST00000422362 380 ntBASIC20.33■□□□□ 0.85
TBC1D3FA6NER0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TBC1D3FA6NER0 AC233263.1-201ENST00000578059 224 ntBASIC20.33■□□□□ 0.85
TBC1D3FA6NER0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
TBC1D3FA6NER0 RN7SL471P-201ENST00000580476 299 ntBASIC20.33■□□□□ 0.85
TBC1D3FA6NER0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TBC1D3FA6NER0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
TBC1D3FA6NER0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 AC069544.1-201ENST00000609399 999 ntBASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.32■□□□□ 0.84
TBC1D3FA6NER0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 AL390719.1-204ENST00000412397 1219 ntBASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 AC006557.6-201ENST00000623071 864 ntBASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TBC1D3FA6NER0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 AC005829.2-201ENST00000571422 1056 ntBASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
TBC1D3FA6NER0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 AL024507.2-201ENST00000606070 2574 ntBASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms