Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDHR4A6H8M9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDHR4A6H8M9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 AC137761.2-201ENST00000561729 223 ntBASIC18.73■□□□□ 0.59
CDHR4A6H8M9 AC145350.3-201ENST00000569033 163 ntBASIC18.73■□□□□ 0.59
CDHR4A6H8M9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDHR4A6H8M9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 AL591742.1-201ENST00000604433 565 ntBASIC18.72■□□□□ 0.59
CDHR4A6H8M9 FAM21FP-204ENST00000608637 956 ntBASIC18.72■□□□□ 0.59
CDHR4A6H8M9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 KRT8P36-201ENST00000489121 1440 ntBASIC18.72■□□□□ 0.59
CDHR4A6H8M9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.72■□□□□ 0.59
CDHR4A6H8M9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.71■□□□□ 0.59
CDHR4A6H8M9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 AC007322.4-201ENST00000509611 723 ntBASIC18.71■□□□□ 0.59
CDHR4A6H8M9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 AC013268.1-206ENST00000638368 961 ntBASIC18.71■□□□□ 0.59
CDHR4A6H8M9 AC112229.1-201ENST00000639295 961 ntBASIC18.71■□□□□ 0.59
CDHR4A6H8M9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.71■□□□□ 0.59
CDHR4A6H8M9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 AL162412.1-201ENST00000567129 965 ntBASIC18.7■□□□□ 0.58
CDHR4A6H8M9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDHR4A6H8M9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 MFSD11-216ENST00000590393 1141 ntBASIC18.69■□□□□ 0.58
CDHR4A6H8M9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR4A6H8M9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms