Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.63■□□□□ 0.73
CNOT1A5YKK6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 AC006011.2-201ENST00000621313 1158 ntBASIC19.62■□□□□ 0.73
CNOT1A5YKK6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 AC026471.6-201ENST00000622954 1905 ntBASIC19.62■□□□□ 0.73
CNOT1A5YKK6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CNOT1A5YKK6 AL121829.2-201ENST00000620908 328 ntBASIC19.62■□□□□ 0.73
CNOT1A5YKK6 AP000550.4-202ENST00000639755 178 ntBASIC19.62■□□□□ 0.73
CNOT1A5YKK6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.62■□□□□ 0.73
CNOT1A5YKK6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 AL031133.1-201ENST00000406807 723 ntBASIC19.61■□□□□ 0.73
CNOT1A5YKK6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 AL450487.1-201ENST00000426799 995 ntBASIC19.61■□□□□ 0.73
CNOT1A5YKK6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CNOT1A5YKK6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CNOT1A5YKK6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT1A5YKK6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.6■□□□□ 0.73
CNOT1A5YKK6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT1A5YKK6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT1A5YKK6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT1A5YKK6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.6■□□□□ 0.73
CNOT1A5YKK6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.6■□□□□ 0.73
CNOT1A5YKK6 AC009947.2-201ENST00000444014 672 ntBASIC19.6■□□□□ 0.73
CNOT1A5YKK6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT1A5YKK6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CNOT1A5YKK6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT1A5YKK6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT1A5YKK6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT1A5YKK6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 AP002982.1-201ENST00000492365 877 ntBASIC19.59■□□□□ 0.73
CNOT1A5YKK6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 LINC01238-205ENST00000567549 1107 ntBASIC19.59■□□□□ 0.73
CNOT1A5YKK6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CNOT1A5YKK6 AC068473.5-201ENST00000616428 2072 ntBASIC19.58■□□□□ 0.73
CNOT1A5YKK6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNOT1A5YKK6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CNOT1A5YKK6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.58■□□□□ 0.73
CNOT1A5YKK6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.73
CNOT1A5YKK6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNOT1A5YKK6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.58■□□□□ 0.72
CNOT1A5YKK6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.58■□□□□ 0.72
CNOT1A5YKK6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.58■□□□□ 0.72
CNOT1A5YKK6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
CNOT1A5YKK6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNOT1A5YKK6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 AC116050.2-201ENST00000612102 1779 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms