Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 AC097658.1-201ENST00000475555 843 ntBASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 KRT8P36-201ENST00000489121 1440 ntBASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV25A0A0B4J276 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 PLK5-205ENST00000642079 1969 ntBASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 AC091874.3-201ENST00000512672 1195 ntBASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 KRT17P1-201ENST00000399211 1546 ntBASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 AF106564.1-201ENST00000607058 2553 ntBASIC15.31■□□□□ 0.04
TRAV25A0A0B4J276 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV25A0A0B4J276 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms