Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CERS3-201ENST00000284382 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MTHFRP42898 SOCS5P2-201ENST00000449637 1359 ntBASIC9.13□□□□□ -0.95
MTHFRP42898 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC9.13□□□□□ -0.95
MTHFRP42898 ATP9B-202ENST00000426216 4361 ntTSL 5 BASIC9.13□□□□□ -0.95
MTHFRP42898 GOSR2-220ENST00000638838 3266 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
MTHFRP42898 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
MTHFRP42898 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MTHFRP42898 SLC9B2-204ENST00000503230 1826 ntTSL 2 BASIC9.13□□□□□ -0.95
MTHFRP42898 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
MTHFRP42898 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
MTHFRP42898 SEZ6L-204ENST00000402979 3306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
MTHFRP42898 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MTHFRP42898 OR10H3-201ENST00000305892 951 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
MTHFRP42898 OR52K1-201ENST00000307632 1030 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
MTHFRP42898 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
MTHFRP42898 RNA5SP336-201ENST00000364189 117 ntBASIC9.13□□□□□ -0.95
MTHFRP42898 RNU4-59P-201ENST00000364447 116 ntBASIC9.13□□□□□ -0.95
MTHFRP42898 LDHAP7-201ENST00000398295 965 ntBASIC9.13□□□□□ -0.95
MTHFRP42898 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC9.13□□□□□ -0.95
MTHFRP42898 AL137793.1-201ENST00000433734 599 ntTSL 3 BASIC9.13□□□□□ -0.95
MTHFRP42898 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC9.13□□□□□ -0.95
MTHFRP42898 UBE2Q1-AS1-201ENST00000441613 432 ntTSL 3 BASIC9.13□□□□□ -0.95
MTHFRP42898 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC9.13□□□□□ -0.95
MTHFRP42898 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC9.13□□□□□ -0.95
MTHFRP42898 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC9.13□□□□□ -0.95
MTHFRP42898 LINC02434-201ENST00000502419 677 ntTSL 3 BASIC9.13□□□□□ -0.95
MTHFRP42898 ATM-209ENST00000526567 560 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MTHFRP42898 VDAC2P2-201ENST00000544463 901 ntBASIC9.13□□□□□ -0.95
MTHFRP42898 AC106028.1-201ENST00000554322 526 ntBASIC9.13□□□□□ -0.95
MTHFRP42898 AC084759.2-202ENST00000557976 1053 ntTSL 5 BASIC9.13□□□□□ -0.95
MTHFRP42898 AC074051.4-201ENST00000564888 892 ntBASIC9.13□□□□□ -0.95
MTHFRP42898 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC9.13□□□□□ -0.95
MTHFRP42898 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC9.13□□□□□ -0.95
MTHFRP42898 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC9.13□□□□□ -0.95
MTHFRP42898 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC9.13□□□□□ -0.95
MTHFRP42898 OR10H3-202ENST00000641646 1029 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
MTHFRP42898 OXNAD1-207ENST00000606098 2288 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
MTHFRP42898 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC9.13□□□□□ -0.95
MTHFRP42898 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MTHFRP42898 LIPC-203ENST00000414170 2968 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MTHFRP42898 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MTHFRP42898 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC9.13□□□□□ -0.95
MTHFRP42898 AC023790.2-201ENST00000543321 2403 ntTSL 5 BASIC9.13□□□□□ -0.95
MTHFRP42898 AC093117.1-201ENST00000413541 2171 ntTSL 2 BASIC9.13□□□□□ -0.95
MTHFRP42898 PABPC1P12-201ENST00000428454 2175 ntBASIC9.13□□□□□ -0.95
MTHFRP42898 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC9.13□□□□□ -0.95
MTHFRP42898 ZNF565-203ENST00000392173 1931 ntAPPRIS P2 TSL 2 BASIC9.13□□□□□ -0.95
MTHFRP42898 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MTHFRP42898 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
MTHFRP42898 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MTHFRP42898 ACBD5-204ENST00000375905 3848 ntAPPRIS P3 TSL 2 BASIC9.13□□□□□ -0.95
MTHFRP42898 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC9.13□□□□□ -0.95
MTHFRP42898 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
MTHFRP42898 PSG8-204ENST00000406636 1610 ntTSL 2 BASIC9.13□□□□□ -0.95
MTHFRP42898 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 CYP2C9-201ENST00000260682 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC9.12□□□□□ -0.95
MTHFRP42898 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
MTHFRP42898 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 AC009102.1-201ENST00000564074 1777 ntTSL 2 BASIC9.12□□□□□ -0.95
MTHFRP42898 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 CD300LD-201ENST00000375352 1303 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
MTHFRP42898 METAP2-202ENST00000323666 3601 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 RACK1-201ENST00000376817 965 ntTSL 5 BASIC9.12□□□□□ -0.95
MTHFRP42898 RNU1-8P-201ENST00000384328 165 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 TTC4P1-201ENST00000427137 1158 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 AC098483.1-202ENST00000436515 967 ntTSL 2 BASIC9.12□□□□□ -0.95
MTHFRP42898 AC138089.1-201ENST00000450847 967 ntTSL 2 BASIC9.12□□□□□ -0.95
MTHFRP42898 AC004947.1-202ENST00000457000 576 ntTSL 4 BASIC9.12□□□□□ -0.95
MTHFRP42898 RN7SL370P-201ENST00000470869 295 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 AC006153.1-201ENST00000480135 371 ntTSL 3 BASIC9.12□□□□□ -0.95
MTHFRP42898 RN7SL745P-201ENST00000484900 299 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 GAPDHP31-201ENST00000509325 1014 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC9.12□□□□□ -0.95
MTHFRP42898 AC226119.2-201ENST00000513501 530 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC9.12□□□□□ -0.95
MTHFRP42898 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC9.12□□□□□ -0.95
MTHFRP42898 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC9.12□□□□□ -0.95
MTHFRP42898 SOD1P2-201ENST00000563903 451 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 AL390728.6-201ENST00000566446 1246 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 AC099684.3-201ENST00000574483 560 ntTSL 4 BASIC9.12□□□□□ -0.95
MTHFRP42898 RN7SL311P-201ENST00000579858 306 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 AC021382.2-201ENST00000584547 922 ntTSL 3 BASIC9.12□□□□□ -0.95
MTHFRP42898 AC060766.7-201ENST00000587012 1212 ntTSL 3 BASIC9.12□□□□□ -0.95
MTHFRP42898 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC9.12□□□□□ -0.95
MTHFRP42898 AC005779.1-201ENST00000591569 540 ntTSL 3 BASIC9.12□□□□□ -0.95
MTHFRP42898 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 EDRF1-AS1-202ENST00000593871 592 ntTSL 5 BASIC9.12□□□□□ -0.95
MTHFRP42898 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC9.12□□□□□ -0.95
MTHFRP42898 AP004247.4-201ENST00000608484 942 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC9.12□□□□□ -0.95
MTHFRP42898 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 CAB39L-202ENST00000355854 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms