Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RN7SKP45-201ENST00000363509 304 ntBASIC8□□□□□ -1.13
SNX18Q96RF0 AC092580.2-201ENST00000414654 469 ntTSL 2 BASIC8□□□□□ -1.13
SNX18Q96RF0 AL591896.1-201ENST00000420211 491 ntTSL 2 BASIC8□□□□□ -1.13
SNX18Q96RF0 LINC01655-201ENST00000431729 423 ntTSL 3 BASIC8□□□□□ -1.13
SNX18Q96RF0 CTBP2P1-201ENST00000431853 245 ntBASIC8□□□□□ -1.13
SNX18Q96RF0 RPL23P4-201ENST00000442836 416 ntBASIC8□□□□□ -1.13
SNX18Q96RF0 RPSAP76-201ENST00000444599 853 ntBASIC8□□□□□ -1.13
SNX18Q96RF0 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC8□□□□□ -1.13
SNX18Q96RF0 OR11Q1P-201ENST00000451582 877 ntBASIC8□□□□□ -1.13
SNX18Q96RF0 ITPKB-AS1-201ENST00000453525 538 ntTSL 2 BASIC8□□□□□ -1.13
SNX18Q96RF0 AC010907.2-201ENST00000456450 693 ntTSL 3 BASIC8□□□□□ -1.13
SNX18Q96RF0 AL078599.2-201ENST00000457116 471 ntTSL 3 BASIC8□□□□□ -1.13
SNX18Q96RF0 AC026704.1-201ENST00000506435 770 ntTSL 3 BASIC8□□□□□ -1.13
SNX18Q96RF0 AC009927.2-201ENST00000520812 481 ntBASIC8□□□□□ -1.13
SNX18Q96RF0 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SNX18Q96RF0 RSF1-IT1-201ENST00000528233 632 ntTSL 2 BASIC8□□□□□ -1.13
SNX18Q96RF0 AP001372.1-202ENST00000533008 344 ntTSL 3 BASIC8□□□□□ -1.13
SNX18Q96RF0 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC8□□□□□ -1.13
SNX18Q96RF0 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC8□□□□□ -1.13
SNX18Q96RF0 AC060814.3-201ENST00000557717 460 ntBASIC8□□□□□ -1.13
SNX18Q96RF0 AC130651.2-201ENST00000573856 536 ntTSL 5 BASIC8□□□□□ -1.13
SNX18Q96RF0 ZFP14-202ENST00000589280 642 ntTSL 3 BASIC8□□□□□ -1.13
SNX18Q96RF0 AL590491.1-202ENST00000618038 394 ntBASIC8□□□□□ -1.13
SNX18Q96RF0 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
SNX18Q96RF0 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SNX18Q96RF0 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8□□□□□ -1.13
SNX18Q96RF0 PTPN20-216ENST00000506080 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SNX18Q96RF0 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC8□□□□□ -1.13
SNX18Q96RF0 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC8□□□□□ -1.13
SNX18Q96RF0 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8□□□□□ -1.13
SNX18Q96RF0 PPM1A-201ENST00000325642 1713 ntTSL 2 BASIC8□□□□□ -1.13
SNX18Q96RF0 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC8□□□□□ -1.13
SNX18Q96RF0 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SNX18Q96RF0 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC8□□□□□ -1.13
SNX18Q96RF0 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
SNX18Q96RF0 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
SNX18Q96RF0 ADGRF4-201ENST00000283303 3162 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SNX18Q96RF0 CAB39-207ENST00000614925 1619 ntTSL 5 BASIC8□□□□□ -1.13
SNX18Q96RF0 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 AC008522.1-201ENST00000639479 2906 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 SLFN13-210ENST00000534689 3058 ntTSL 2 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 AC122688.4-201ENST00000623279 4394 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 FMO9P-201ENST00000477875 1364 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 PPP1R11-203ENST00000376765 1536 ntTSL 3 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 ZSCAN30-201ENST00000333206 4097 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 TAS2R60-201ENST00000332690 957 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 CD1E-201ENST00000368154 435 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 EPSTI1-203ENST00000398762 957 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 AL365214.1-201ENST00000404237 997 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 BZW2-203ENST00000407633 898 ntTSL 3 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 PDE1A-203ENST00000409365 2034 ntTSL 5 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 RN7SKP251-201ENST00000410830 314 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 AC008781.1-201ENST00000422040 621 ntTSL 3 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 LINC00112-201ENST00000432830 522 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 AC114492.1-201ENST00000434936 454 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 AC012363.2-201ENST00000437837 555 ntTSL 4 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 RPL17P1-201ENST00000445304 536 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 AC073626.2-201ENST00000449443 316 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 TSSK1A-201ENST00000450724 768 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 HS6ST2-AS1-201ENST00000455269 550 ntTSL 3 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 RN7SL507P-201ENST00000474076 296 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 C2orf74-205ENST00000488469 1070 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 INTS6-215ENST00000490542 2307 ntTSL 5 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 AC136628.1-201ENST00000503218 561 ntTSL 4 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 RAB5CP2-201ENST00000505368 637 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 DCAF13-203ENST00000519682 837 ntTSL 2 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 CARD8-224ENST00000522431 622 ntTSL 2 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 RBM4B-207ENST00000531969 769 ntTSL 3 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 AC090531.1-201ENST00000547168 923 ntTSL 3 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 MKRN2OS-203ENST00000564146 985 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 RN7SL198P-201ENST00000583190 258 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 AC011477.1-201ENST00000591884 544 ntTSL 5 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 RPL17P3-201ENST00000605695 525 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 CR769775.3-201ENST00000610388 219 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 AC004678.1-201ENST00000615016 929 ntBASIC7.99□□□□□ -1.13
SNX18Q96RF0 CEACAM5-209ENST00000616453 1160 ntTSL 5 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 OR4Q2-202ENST00000622436 921 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 NELFE-214ENST00000625905 111 ntTSL 5 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 RUBCNL-202ENST00000378784 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNX18Q96RF0 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms