Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 MAGEC3-202ENST00000409007 1290 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
UBE4BO95155 HMGN1P34-201ENST00000413023 290 ntBASIC9.46□□□□□ -0.9
UBE4BO95155 BLNK-204ENST00000427367 1284 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
UBE4BO95155 AL392003.2-201ENST00000451015 679 ntBASIC9.46□□□□□ -0.9
UBE4BO95155 DAP3P2-201ENST00000458547 510 ntBASIC9.46□□□□□ -0.9
UBE4BO95155 PCBP1-AS1-242ENST00000458686 1020 ntTSL 5 BASIC9.46□□□□□ -0.9
UBE4BO95155 GUSBP3-201ENST00000509348 423 ntBASIC9.46□□□□□ -0.9
UBE4BO95155 AL357093.1-201ENST00000556926 458 ntTSL 2 BASIC9.46□□□□□ -0.9
UBE4BO95155 AC110027.1-201ENST00000557753 403 ntBASIC9.46□□□□□ -0.9
UBE4BO95155 AC010809.2-201ENST00000560404 964 ntTSL 5 BASIC9.46□□□□□ -0.9
UBE4BO95155 VN1R65P-201ENST00000566443 808 ntBASIC9.46□□□□□ -0.9
UBE4BO95155 AC009630.2-202ENST00000578500 884 ntTSL 3 BASIC9.46□□□□□ -0.9
UBE4BO95155 AL662797.3-201ENST00000607476 773 ntBASIC9.46□□□□□ -0.9
UBE4BO95155 GNG2-216ENST00000615906 1294 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
UBE4BO95155 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC9.46□□□□□ -0.9
UBE4BO95155 GPN1-202ENST00000407583 1395 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
UBE4BO95155 METTL15-204ENST00000407364 4242 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
UBE4BO95155 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
UBE4BO95155 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC9.46□□□□□ -0.9
UBE4BO95155 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC9.46□□□□□ -0.9
UBE4BO95155 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
UBE4BO95155 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
UBE4BO95155 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
UBE4BO95155 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC9.45□□□□□ -0.9
UBE4BO95155 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBE4BO95155 AP003027.1-202ENST00000366160 2076 ntBASIC9.45□□□□□ -0.9
UBE4BO95155 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UBE4BO95155 NHSL2-208ENST00000639939 3402 ntTSL 5 BASIC9.45□□□□□ -0.9
UBE4BO95155 GLDCP1-201ENST00000510885 2678 ntBASIC9.45□□□□□ -0.9
UBE4BO95155 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC9.45□□□□□ -0.9
UBE4BO95155 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UBE4BO95155 AC114980.1-201ENST00000505668 3157 ntBASIC9.45□□□□□ -0.9
UBE4BO95155 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
UBE4BO95155 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC9.45□□□□□ -0.9
UBE4BO95155 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
UBE4BO95155 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
UBE4BO95155 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC9.45□□□□□ -0.9
UBE4BO95155 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UBE4BO95155 AL121990.1-201ENST00000417605 591 ntTSL 3 BASIC9.45□□□□□ -0.9
UBE4BO95155 PAICSP5-201ENST00000430406 1217 ntBASIC9.45□□□□□ -0.9
UBE4BO95155 LINC01865-201ENST00000430529 845 ntTSL 3 BASIC9.45□□□□□ -0.9
UBE4BO95155 SPATA24-203ENST00000451821 646 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UBE4BO95155 RN7SL337P-201ENST00000462468 301 ntBASIC9.45□□□□□ -0.9
UBE4BO95155 AC055753.1-201ENST00000510575 889 ntBASIC9.45□□□□□ -0.9
UBE4BO95155 AC109588.1-202ENST00000515720 880 ntTSL 3 BASIC9.45□□□□□ -0.9
UBE4BO95155 AP002892.2-201ENST00000544195 560 ntTSL 4 BASIC9.45□□□□□ -0.9
UBE4BO95155 CD63-206ENST00000548160 648 ntTSL 2 BASIC9.45□□□□□ -0.9
UBE4BO95155 LINC00520-204ENST00000556417 778 ntTSL 3 BASIC9.45□□□□□ -0.9
UBE4BO95155 AC025280.1-201ENST00000562393 260 ntTSL 2 BASIC9.45□□□□□ -0.9
UBE4BO95155 AC004253.1-201ENST00000583236 488 ntTSL 5 BASIC9.45□□□□□ -0.9
UBE4BO95155 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC9.45□□□□□ -0.9
UBE4BO95155 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
UBE4BO95155 LINC02211-202ENST00000641091 839 ntBASIC9.45□□□□□ -0.9
UBE4BO95155 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
UBE4BO95155 CEACAM1-204ENST00000358394 1484 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UBE4BO95155 AL158206.1-201ENST00000563205 1965 ntBASIC9.45□□□□□ -0.9
UBE4BO95155 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBE4BO95155 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
UBE4BO95155 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBE4BO95155 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
UBE4BO95155 PAX6-259ENST00000639916 2622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBE4BO95155 SIAH1-201ENST00000356721 2415 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBE4BO95155 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC9.45□□□□□ -0.9
UBE4BO95155 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UBE4BO95155 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
UBE4BO95155 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC9.45□□□□□ -0.9
UBE4BO95155 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
UBE4BO95155 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
UBE4BO95155 ITPRIPL1-201ENST00000361124 4295 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 TCL6-207ENST00000483087 2194 ntTSL 2 BASIC9.44□□□□□ -0.9
UBE4BO95155 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBE4BO95155 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC9.44□□□□□ -0.9
UBE4BO95155 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBE4BO95155 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBE4BO95155 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
UBE4BO95155 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBE4BO95155 PRYP4-201ENST00000306589 444 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 MTCP1-201ENST00000362018 570 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
UBE4BO95155 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBE4BO95155 AL096855.1-201ENST00000449895 516 ntTSL 3 BASIC9.44□□□□□ -0.9
UBE4BO95155 AC018638.4-201ENST00000465971 1150 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 AC117382.1-201ENST00000468074 730 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 RPS10P16-201ENST00000483812 496 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 ALG1L12P-201ENST00000515046 434 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC9.44□□□□□ -0.9
UBE4BO95155 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC9.44□□□□□ -0.9
UBE4BO95155 TRAPPC1-202ENST00000540486 759 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
UBE4BO95155 AC005632.1-201ENST00000550637 576 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC9.44□□□□□ -0.9
UBE4BO95155 AC007221.1-201ENST00000570038 796 ntTSL 5 BASIC9.44□□□□□ -0.9
UBE4BO95155 AP001178.2-201ENST00000580007 326 ntTSL 3 BASIC9.44□□□□□ -0.9
UBE4BO95155 AC008991.2-201ENST00000587850 487 ntTSL 3 BASIC9.44□□□□□ -0.9
UBE4BO95155 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC9.44□□□□□ -0.9
UBE4BO95155 AC174071.1-201ENST00000603069 517 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 PRYP3-202ENST00000607210 444 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 MIR6737-201ENST00000617385 70 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 AC010722.1-202ENST00000618284 573 ntTSL 4 BASIC9.44□□□□□ -0.9
UBE4BO95155 LINC01002-228ENST00000633402 565 ntTSL 5 BASIC9.44□□□□□ -0.9
UBE4BO95155 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 ITFG2-AS1-202ENST00000636122 962 ntTSL 5 BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms