Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL022323.3-201ENST00000623888 5388 ntBASIC9.25□□□□□ -0.93
MTHFRP42898 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
MTHFRP42898 ANKRD20A11P-206ENST00000451663 3717 ntBASIC9.25□□□□□ -0.93
MTHFRP42898 AC079341.1-201ENST00000567769 2266 ntBASIC9.25□□□□□ -0.93
MTHFRP42898 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MTHFRP42898 AC008739.5-201ENST00000623035 1938 ntBASIC9.25□□□□□ -0.93
MTHFRP42898 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC9.25□□□□□ -0.93
MTHFRP42898 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MTHFRP42898 DUSP3-201ENST00000226004 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 CAST-222ENST00000508579 1758 ntTSL 2 BASIC9.24□□□□□ -0.93
MTHFRP42898 AC092718.7-201ENST00000623577 1776 ntBASIC9.24□□□□□ -0.93
MTHFRP42898 ZNF239-201ENST00000306006 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 RNF14-205ENST00000394520 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 STXBP5L-208ENST00000497029 3036 ntTSL 5 BASIC9.24□□□□□ -0.93
MTHFRP42898 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 ITPRIPL1-201ENST00000361124 4295 ntBASIC9.24□□□□□ -0.93
MTHFRP42898 TBXAS1-209ENST00000455353 1435 ntTSL 2 BASIC9.24□□□□□ -0.93
MTHFRP42898 UCA1-201ENST00000397381 2299 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 STRADA-226ENST00000638276 1865 ntTSL 5 BASIC9.24□□□□□ -0.93
MTHFRP42898 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 SCMH1-203ENST00000361191 2906 ntTSL 5 BASIC9.24□□□□□ -0.93
MTHFRP42898 LDHA-218ENST00000540430 2305 ntTSL 2 BASIC9.24□□□□□ -0.93
MTHFRP42898 ADGRF4-201ENST00000283303 3162 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 OR5M9-201ENST00000279791 933 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
MTHFRP42898 OR51G2-201ENST00000322013 1023 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
MTHFRP42898 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
MTHFRP42898 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 OR11G2-201ENST00000357366 1038 ntBASIC9.24□□□□□ -0.93
MTHFRP42898 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 CREM-213ENST00000374734 711 ntTSL 5 BASIC9.24□□□□□ -0.93
MTHFRP42898 MIR654-201ENST00000385199 81 ntBASIC9.24□□□□□ -0.93
MTHFRP42898 LINC02271-201ENST00000398777 546 ntTSL 4 BASIC9.24□□□□□ -0.93
MTHFRP42898 MIR1269A-201ENST00000408636 105 ntBASIC9.24□□□□□ -0.93
MTHFRP42898 RN7SKP136-201ENST00000410927 300 ntBASIC9.24□□□□□ -0.93
MTHFRP42898 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC9.24□□□□□ -0.93
MTHFRP42898 AP001062.2-201ENST00000426029 127 ntTSL 3 BASIC9.24□□□□□ -0.93
MTHFRP42898 LINC01425-202ENST00000430060 760 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 AC239727.1-201ENST00000431432 623 ntTSL 3 BASIC9.24□□□□□ -0.93
MTHFRP42898 AC005020.1-201ENST00000455459 526 ntBASIC9.24□□□□□ -0.93
MTHFRP42898 CREM-231ENST00000479070 939 ntTSL 5 BASIC9.24□□□□□ -0.93
MTHFRP42898 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 RN7SL792P-201ENST00000496286 305 ntBASIC9.24□□□□□ -0.93
MTHFRP42898 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC9.24□□□□□ -0.93
MTHFRP42898 MS4A6A-217ENST00000533023 780 ntTSL 3 BASIC9.24□□□□□ -0.93
MTHFRP42898 C17orf80-205ENST00000535032 2129 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 AC093249.3-201ENST00000562444 424 ntBASIC9.24□□□□□ -0.93
MTHFRP42898 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC9.24□□□□□ -0.93
MTHFRP42898 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC9.24□□□□□ -0.93
MTHFRP42898 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC9.24□□□□□ -0.93
MTHFRP42898 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 SRP19-204ENST00000505459 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 AC022182.3-201ENST00000529239 2167 ntBASIC9.24□□□□□ -0.93
MTHFRP42898 RBBP8-205ENST00000399725 3260 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
MTHFRP42898 DTL-206ENST00000542077 4471 ntTSL 2 BASIC9.24□□□□□ -0.93
MTHFRP42898 NNT-208ENST00000512996 4288 ntTSL 5 BASIC9.24□□□□□ -0.93
MTHFRP42898 AC079174.2-201ENST00000611145 2028 ntBASIC9.24□□□□□ -0.93
MTHFRP42898 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MTHFRP42898 ELP2-205ENST00000442325 2722 ntTSL 2 BASIC9.24□□□□□ -0.93
MTHFRP42898 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MTHFRP42898 WWC1-209ENST00000521089 3562 ntAPPRIS ALT1 TSL 2 BASIC9.23□□□□□ -0.93
MTHFRP42898 PATE2-201ENST00000358524 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
MTHFRP42898 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
MTHFRP42898 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
MTHFRP42898 ZNF45-201ENST00000269973 3898 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
MTHFRP42898 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC9.23□□□□□ -0.93
MTHFRP42898 BCO2-208ENST00000526088 1983 ntTSL 2 BASIC9.23□□□□□ -0.93
MTHFRP42898 HLF-208ENST00000573945 2977 ntTSL 5 BASIC9.23□□□□□ -0.93
MTHFRP42898 CCR6-203ENST00000400926 3216 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
MTHFRP42898 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC9.23□□□□□ -0.93
MTHFRP42898 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MTHFRP42898 CD200-203ENST00000473539 1524 ntTSL 2 BASIC9.23□□□□□ -0.93
MTHFRP42898 AL080312.1-201ENST00000256654 824 ntBASIC9.23□□□□□ -0.93
MTHFRP42898 CLYBL-201ENST00000339105 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MTHFRP42898 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MTHFRP42898 TRAV17-201ENST00000390445 484 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
MTHFRP42898 RPSAP42-201ENST00000403415 878 ntBASIC9.23□□□□□ -0.93
MTHFRP42898 AC116050.1-206ENST00000423774 213 ntBASIC9.23□□□□□ -0.93
MTHFRP42898 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC9.23□□□□□ -0.93
MTHFRP42898 AC244034.1-201ENST00000428027 792 ntBASIC9.23□□□□□ -0.93
MTHFRP42898 Z74696.1-201ENST00000428208 1123 ntBASIC9.23□□□□□ -0.93
MTHFRP42898 LYZL4-202ENST00000441172 838 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
MTHFRP42898 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC9.23□□□□□ -0.93
MTHFRP42898 LINC01647-201ENST00000453135 1285 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
MTHFRP42898 SLC25A15P2-201ENST00000457292 338 ntBASIC9.23□□□□□ -0.93
MTHFRP42898 RN7SL505P-201ENST00000482644 293 ntBASIC9.23□□□□□ -0.93
MTHFRP42898 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC9.23□□□□□ -0.93
MTHFRP42898 RN7SKP197-201ENST00000517077 297 ntBASIC9.23□□□□□ -0.93
MTHFRP42898 AC008870.2-201ENST00000568262 1024 ntBASIC9.23□□□□□ -0.93
MTHFRP42898 RN7SL203P-201ENST00000579600 296 ntBASIC9.23□□□□□ -0.93
MTHFRP42898 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC9.23□□□□□ -0.93
MTHFRP42898 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC9.23□□□□□ -0.93
MTHFRP42898 AC015878.2-201ENST00000584331 361 ntTSL 5 BASIC9.23□□□□□ -0.93
MTHFRP42898 AC123912.1-201ENST00000594564 447 ntTSL 3 BASIC9.23□□□□□ -0.93
MTHFRP42898 AC243960.5-201ENST00000597858 255 ntBASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms