Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 MAPK10-210ENST00000449047 2382 ntTSL 5 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 GFM2-207ENST00000509430 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 ZNF565-203ENST00000392173 1931 ntAPPRIS P2 TSL 2 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 RBM18-201ENST00000417201 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 IL13-201ENST00000304506 1283 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 OR1F1-201ENST00000304646 942 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 NECAP1P1-201ENST00000320802 830 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 LST1-209ENST00000376096 565 ntTSL 2 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AL512430.3-201ENST00000405355 441 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 TMEM14EP-201ENST00000408960 378 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 STSP1-201ENST00000412493 1151 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 SLC25A26-203ENST00000413054 1096 ntTSL 5 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 ZFY-AS1-201ENST00000417305 500 ntTSL 2 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AL392088.1-201ENST00000428364 670 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 AL359094.1-210ENST00000432554 730 ntTSL 3 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 LINC00385-201ENST00000435044 374 ntTSL 3 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 RPE-210ENST00000438204 796 ntTSL 2 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AL162253.1-201ENST00000443792 758 ntTSL 3 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 RPE-213ENST00000445268 668 ntTSL 5 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 LHFPL3-AS2-201ENST00000453666 923 ntTSL 3 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AC080013.1-205ENST00000477589 1087 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 PAQR9-AS1-201ENST00000478823 610 ntTSL 3 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AC100771.1-201ENST00000496450 279 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 AC104063.1-201ENST00000504840 702 ntTSL 3 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AC146949.1-201ENST00000505946 423 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 LINC01411-202ENST00000506862 744 ntTSL 3 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AC146944.1-201ENST00000508439 418 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 LINC01606-206ENST00000520929 411 ntTSL 3 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 UBB-204ENST00000535788 704 ntTSL 2 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 PLCB2-AS1-201ENST00000559520 568 ntTSL 3 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AC009414.2-201ENST00000565283 366 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 LSM3P5-201ENST00000566307 306 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 MIR3650-201ENST00000581972 60 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 ZNF350-AS1-201ENST00000595010 698 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AC011487.1-202ENST00000597004 551 ntTSL 4 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AC011465.1-201ENST00000599092 328 ntTSL 3 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 MIR6083-201ENST00000612737 106 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AP000590.1-201ENST00000624943 464 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 LAMTOR5-AS1-236ENST00000626261 464 ntTSL 5 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AL390726.6-203ENST00000636076 473 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 MIR3160-2-201ENST00000637870 81 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 NPIPB10P-201ENST00000424293 1354 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 TRIM64FP-201ENST00000427305 1371 ntBASIC8.06□□□□□ -1.12
SNX18Q96RF0 AC007920.2-201ENST00000636210 1973 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 NF1P1-201ENST00000604105 2645 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 VIPR1-AS1-201ENST00000452639 1435 ntTSL 5 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SNX18Q96RF0 HEPACAM2-204ENST00000453812 1869 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SNX18Q96RF0 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SNX18Q96RF0 RHBDD1-203ENST00000409053 538 ntTSL 4 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 MAGEA13P-201ENST00000418272 951 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 AC009226.1-203ENST00000418850 741 ntTSL 5 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 OR8B9P-201ENST00000419756 925 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 CARM1P1-201ENST00000426329 1185 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 LINC01105-202ENST00000431182 708 ntTSL 4 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 HNRNPA1P39-201ENST00000440547 960 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 AL606468.1-201ENST00000444750 510 ntTSL 3 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 AL008627.1-201ENST00000446953 486 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 LINC01696-201ENST00000448988 492 ntTSL 2 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 AC020595.1-201ENST00000456446 533 ntTSL 3 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 RPL12P21-201ENST00000472214 518 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 AC021106.2-201ENST00000505310 710 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 TBCA-208ENST00000520361 446 ntTSL 2 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 IGKV3-34-201ENST00000521692 293 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 IGHV3-50-201ENST00000522107 317 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 GLYATL1P3-201ENST00000527482 909 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 CXorf56-203ENST00000536133 1089 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 LINC02327-206ENST00000551588 885 ntTSL 5 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 AL352977.1-201ENST00000553464 453 ntTSL 5 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 LINC02328-201ENST00000553668 741 ntTSL 3 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 RN7SL140P-201ENST00000581321 294 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms