Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC131025.1-201ENST00000521756 588 ntTSL 3 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 LINC01024-206ENST00000522747 1044 ntTSL 3 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 SDC2-207ENST00000522911 677 ntTSL 3 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 LINC02359-201ENST00000545642 643 ntTSL 3 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 C12orf73-203ENST00000546540 590 ntTSL 2 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 AC027288.3-203ENST00000553165 448 ntTSL 3 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 AC102797.1-201ENST00000565127 545 ntTSL 4 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 AC079322.1-201ENST00000568345 1135 ntBASIC8.08□□□□□ -1.12
SNX18Q96RF0 RPIAP1-201ENST00000587900 742 ntBASIC8.08□□□□□ -1.12
SNX18Q96RF0 AC092634.5-207ENST00000596569 805 ntTSL 5 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 SDCBP2-AS1-202ENST00000607947 808 ntTSL 3 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 MIR6124-201ENST00000617177 85 ntBASIC8.08□□□□□ -1.12
SNX18Q96RF0 AC011389.3-201ENST00000623273 999 ntBASIC8.08□□□□□ -1.12
SNX18Q96RF0 AC244517.8-201ENST00000623995 467 ntTSL 4 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 CFTRP2-201ENST00000634304 199 ntBASIC8.08□□□□□ -1.12
SNX18Q96RF0 TRIO-225ENST00000639876 769 ntTSL 5 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 NNT-208ENST00000512996 4288 ntTSL 5 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 AC132825.4-201ENST00000582527 3644 ntBASIC8.08□□□□□ -1.12
SNX18Q96RF0 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 FIGNL1-214ENST00000617389 3259 ntAPPRIS P1 TSL 4 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 SLC14A1-202ENST00000402943 1390 ntTSL 2 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 STRADA-227ENST00000638309 1383 ntTSL 5 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 AP002765.1-201ENST00000528675 1507 ntBASIC8.08□□□□□ -1.12
SNX18Q96RF0 FANCB-202ENST00000398334 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 DPF3-216ENST00000614862 4221 ntTSL 5 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 TNPO3-205ENST00000627585 4514 ntTSL 2 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 TMEM150C-204ENST00000515780 3296 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 ASTE1-201ENST00000264992 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SNX18Q96RF0 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 ZNF160-201ENST00000355147 1304 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SNX18Q96RF0 KRTAP9-6-201ENST00000391355 1303 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 CDCA3-204ENST00000535406 1327 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 LINC01550-202ENST00000502187 2455 ntTSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 SP110-215ENST00000540870 2032 ntTSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 NVL-202ENST00000340871 2431 ntTSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SNX18Q96RF0 ELAVL4-201ENST00000357083 1442 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SNX18Q96RF0 CASC19-205ENST00000641013 1411 ntBASIC8.07□□□□□ -1.12
SNX18Q96RF0 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 KLHL1-202ENST00000545028 3966 ntTSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 RNASE1-201ENST00000340900 878 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AL031229.1-201ENST00000404273 224 ntBASIC8.07□□□□□ -1.12
SNX18Q96RF0 AC007036.2-201ENST00000415934 437 ntTSL 3 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 RPL12P29-201ENST00000425565 457 ntBASIC8.07□□□□□ -1.12
SNX18Q96RF0 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AF130417.1-201ENST00000432412 478 ntTSL 3 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 ARL4AP4-201ENST00000434170 518 ntBASIC8.07□□□□□ -1.12
SNX18Q96RF0 AL138720.1-202ENST00000437648 1017 ntTSL 5 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AL355537.1-201ENST00000446589 450 ntTSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 DEFA10P-201ENST00000455014 288 ntBASIC8.07□□□□□ -1.12
SNX18Q96RF0 C3orf67-AS1-201ENST00000463703 562 ntTSL 4 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 PRKAG2-AS1-201ENST00000464464 382 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AP002026.1-205ENST00000509295 915 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SNX18Q96RF0 ARHGDIB-207ENST00000541644 911 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AC089998.3-201ENST00000549715 493 ntBASIC8.07□□□□□ -1.12
SNX18Q96RF0 ARPP19-203ENST00000561971 799 ntTSL 3 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 VN1R67P-201ENST00000568379 913 ntBASIC8.07□□□□□ -1.12
SNX18Q96RF0 AC010542.2-201ENST00000568560 511 ntTSL 5 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AC106037.1-201ENST00000584148 336 ntTSL 5 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AC136469.1-201ENST00000595706 511 ntTSL 5 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AL355989.2-201ENST00000603304 512 ntBASIC8.07□□□□□ -1.12
SNX18Q96RF0 AL031281.2-201ENST00000606754 748 ntBASIC8.07□□□□□ -1.12
SNX18Q96RF0 AC079766.1-201ENST00000608774 427 ntBASIC8.07□□□□□ -1.12
SNX18Q96RF0 AC110741.3-201ENST00000611983 659 ntBASIC8.07□□□□□ -1.12
SNX18Q96RF0 Metazoa_SRP.162-201ENST00000613066 277 ntBASIC8.07□□□□□ -1.12
SNX18Q96RF0 ARL17A-206ENST00000622488 524 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AC008870.5-201ENST00000624143 650 ntBASIC8.07□□□□□ -1.12
SNX18Q96RF0 LINC00282-201ENST00000626362 654 ntAPPRIS P5 TSL 4 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SNX18Q96RF0 SLC12A6-203ENST00000397702 4096 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SNX18Q96RF0 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SNX18Q96RF0 VPS45-201ENST00000369128 2224 ntTSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 TNS1-202ENST00000310858 1792 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SNX18Q96RF0 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AC124017.1-202ENST00000506950 1616 ntTSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 AC004158.1-202ENST00000624327 1645 ntTSL 2 BASIC8.07□□□□□ -1.12
SNX18Q96RF0 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SNX18Q96RF0 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNX18Q96RF0 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.06□□□□□ -1.12
SNX18Q96RF0 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms