Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RSF1-IT1-201ENST00000528233 632 ntTSL 2 BASIC9.12□□□□□ -0.95
SLC1A1P43005 LINC02548-201ENST00000531749 484 ntTSL 3 BASIC9.12□□□□□ -0.95
SLC1A1P43005 PCED1B-AS1-205ENST00000548222 625 ntTSL 3 BASIC9.12□□□□□ -0.95
SLC1A1P43005 RN7SL321P-201ENST00000581742 299 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 U62631.1-201ENST00000597110 435 ntTSL 3 BASIC9.12□□□□□ -0.95
SLC1A1P43005 SMARCE1P7-201ENST00000605515 485 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 U3.50-201ENST00000611947 228 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 AC015574.1-201ENST00000615194 489 ntTSL 5 BASIC9.12□□□□□ -0.95
SLC1A1P43005 MIR6741-201ENST00000618782 63 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 AC098476.1-201ENST00000623173 1025 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 AC012513.3-201ENST00000623250 2116 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 LIAS-210ENST00000638451 1159 ntTSL 5 BASIC9.12□□□□□ -0.95
SLC1A1P43005 AC011978.1-201ENST00000523386 1406 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC9.12□□□□□ -0.95
SLC1A1P43005 AC055716.2-201ENST00000552545 2441 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SLC1A1P43005 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC9.12□□□□□ -0.95
SLC1A1P43005 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC9.12□□□□□ -0.95
SLC1A1P43005 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SLC1A1P43005 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC9.11□□□□□ -0.95
SLC1A1P43005 ELP3-202ENST00000380353 3078 ntTSL 2 BASIC9.11□□□□□ -0.95
SLC1A1P43005 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
SLC1A1P43005 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
SLC1A1P43005 ITPRIPL1-201ENST00000361124 4295 ntBASIC9.11□□□□□ -0.95
SLC1A1P43005 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
SLC1A1P43005 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 CBWD1-205ENST00000382389 1807 ntTSL 2 BASIC9.11□□□□□ -0.95
SLC1A1P43005 ATP5O-201ENST00000290299 932 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 IGFL3-201ENST00000341415 662 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 SNORD3G-201ENST00000362796 215 ntBASIC9.11□□□□□ -0.95
SLC1A1P43005 AL121999.1-201ENST00000420156 332 ntTSL 3 BASIC9.11□□□□□ -0.95
SLC1A1P43005 AC119428.2-201ENST00000449958 850 ntTSL 2 BASIC9.11□□□□□ -0.95
SLC1A1P43005 CASQ1-202ENST00000467691 595 ntTSL 3 BASIC9.11□□□□□ -0.95
SLC1A1P43005 IGKV2D-18-201ENST00000519785 375 ntBASIC9.11□□□□□ -0.95
SLC1A1P43005 LRTOMT-216ENST00000539271 570 ntTSL 4 BASIC9.11□□□□□ -0.95
SLC1A1P43005 GLYCAM1-204ENST00000550226 781 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 AC009432.1-201ENST00000560391 648 ntTSL 3 BASIC9.11□□□□□ -0.95
SLC1A1P43005 AC126323.1-201ENST00000561706 611 ntTSL 3 BASIC9.11□□□□□ -0.95
SLC1A1P43005 SHBG-209ENST00000572182 479 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 SNRPD2-208ENST00000590212 454 ntTSL 3 BASIC9.11□□□□□ -0.95
SLC1A1P43005 AC008734.2-201ENST00000595277 477 ntBASIC9.11□□□□□ -0.95
SLC1A1P43005 SCGB2B3P-201ENST00000599388 409 ntBASIC9.11□□□□□ -0.95
SLC1A1P43005 Metazoa_SRP.101-201ENST00000611704 303 ntBASIC9.11□□□□□ -0.95
SLC1A1P43005 YARS-210ENST00000616261 1167 ntTSL 5 BASIC9.11□□□□□ -0.95
SLC1A1P43005 GLTP-206ENST00000617457 969 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC9.11□□□□□ -0.95
SLC1A1P43005 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC9.11□□□□□ -0.95
SLC1A1P43005 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC9.11□□□□□ -0.95
SLC1A1P43005 WDR92-202ENST00000406245 1401 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC9.11□□□□□ -0.95
SLC1A1P43005 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 CDY15P-201ENST00000421995 1570 ntBASIC9.11□□□□□ -0.95
SLC1A1P43005 CDY22P-201ENST00000451423 1554 ntBASIC9.11□□□□□ -0.95
SLC1A1P43005 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC9.11□□□□□ -0.95
SLC1A1P43005 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
SLC1A1P43005 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC9.11□□□□□ -0.95
SLC1A1P43005 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SLC1A1P43005 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC9.11□□□□□ -0.95
SLC1A1P43005 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 EXOSC9-211ENST00000512454 1543 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
SLC1A1P43005 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC9.1□□□□□ -0.95
SLC1A1P43005 CRIPT-201ENST00000238892 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 SNORA58.1-201ENST00000364133 136 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 CD1E-201ENST00000368154 435 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 BPIFA3-202ENST00000375454 1116 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
SLC1A1P43005 RCL1-201ENST00000381728 758 ntTSL 3 BASIC9.1□□□□□ -0.95
SLC1A1P43005 MIR623-201ENST00000384986 98 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 SNORD88A-201ENST00000408314 91 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 DUTP8-201ENST00000418412 489 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 AC006195.1-201ENST00000423599 923 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 AC016027.1-201ENST00000426483 805 ntTSL 3 BASIC9.1□□□□□ -0.95
SLC1A1P43005 AC005099.1-201ENST00000442083 610 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 MEG8-205ENST00000442197 625 ntTSL 2 BASIC9.1□□□□□ -0.95
SLC1A1P43005 AC073188.1-201ENST00000442493 361 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC9.1□□□□□ -0.95
SLC1A1P43005 AC092634.4-203ENST00000451395 448 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 AC006455.3-201ENST00000454641 333 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 ENPP7P2-201ENST00000462675 943 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 UQCRBP3-201ENST00000509483 312 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 IGLC5-201ENST00000519670 293 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 AC104261.1-202ENST00000557946 509 ntTSL 3 BASIC9.1□□□□□ -0.95
SLC1A1P43005 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC9.1□□□□□ -0.95
SLC1A1P43005 FRG2KP-201ENST00000565692 971 ntTSL 3 BASIC9.1□□□□□ -0.95
SLC1A1P43005 AF067845.1-201ENST00000567210 1192 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 ZNF678-205ENST00000608949 929 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 AL109920.1-201ENST00000632749 415 ntTSL 2 BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms