Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC31.2■■■□□ 2.58
CDC42BPBQ9Y5S2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC31.2■■■□□ 2.58
CDC42BPBQ9Y5S2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
CDC42BPBQ9Y5S2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC31.19■■■□□ 2.58
CDC42BPBQ9Y5S2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPBQ9Y5S2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
CDC42BPBQ9Y5S2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPBQ9Y5S2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPBQ9Y5S2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPBQ9Y5S2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC31.18■■■□□ 2.58
CDC42BPBQ9Y5S2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPBQ9Y5S2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDC42BPBQ9Y5S2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDC42BPBQ9Y5S2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
CDC42BPBQ9Y5S2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC31.17■■■□□ 2.58
CDC42BPBQ9Y5S2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC31.17■■■□□ 2.58
CDC42BPBQ9Y5S2 AL445228.2-201ENST00000605589 952 ntBASIC31.17■■■□□ 2.58
CDC42BPBQ9Y5S2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC31.17■■■□□ 2.58
CDC42BPBQ9Y5S2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDC42BPBQ9Y5S2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC31.17■■■□□ 2.58
CDC42BPBQ9Y5S2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC31.17■■■□□ 2.58
CDC42BPBQ9Y5S2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPBQ9Y5S2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPBQ9Y5S2 NUDT16P1-203ENST00000513809 620 ntBASIC31.16■■■□□ 2.58
CDC42BPBQ9Y5S2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC31.16■■■□□ 2.58
CDC42BPBQ9Y5S2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPBQ9Y5S2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPBQ9Y5S2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPBQ9Y5S2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC31.16■■■□□ 2.58
CDC42BPBQ9Y5S2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPBQ9Y5S2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC31.16■■■□□ 2.58
CDC42BPBQ9Y5S2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 AC026471.5-201ENST00000615068 467 ntBASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 AL390719.1-204ENST00000412397 1219 ntBASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 TK2-213ENST00000563369 882 ntTSL 5 BASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
CDC42BPBQ9Y5S2 AC124283.5-201ENST00000624661 1809 ntBASIC31.14■■■□□ 2.58
CDC42BPBQ9Y5S2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC31.14■■■□□ 2.58
CDC42BPBQ9Y5S2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC31.14■■■□□ 2.58
CDC42BPBQ9Y5S2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
CDC42BPBQ9Y5S2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
CDC42BPBQ9Y5S2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC31.14■■■□□ 2.58
CDC42BPBQ9Y5S2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC31.14■■■□□ 2.58
CDC42BPBQ9Y5S2 AL121829.2-201ENST00000620908 328 ntBASIC31.14■■■□□ 2.58
CDC42BPBQ9Y5S2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
CDC42BPBQ9Y5S2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CDC42BPBQ9Y5S2 GOLGA2P6-201ENST00000340929 2049 ntBASIC31.13■■■□□ 2.57
CDC42BPBQ9Y5S2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC31.13■■■□□ 2.57
CDC42BPBQ9Y5S2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
CDC42BPBQ9Y5S2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC31.12■■■□□ 2.57
CDC42BPBQ9Y5S2 AP003071.4-201ENST00000562276 1284 ntBASIC31.12■■■□□ 2.57
CDC42BPBQ9Y5S2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CDC42BPBQ9Y5S2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC31.12■■■□□ 2.57
CDC42BPBQ9Y5S2 AC242852.2-201ENST00000615738 1807 ntBASIC31.12■■■□□ 2.57
CDC42BPBQ9Y5S2 KRT8P9-201ENST00000558927 1449 ntBASIC31.12■■■□□ 2.57
CDC42BPBQ9Y5S2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
CDC42BPBQ9Y5S2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC31.12■■■□□ 2.57
CDC42BPBQ9Y5S2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CDC42BPBQ9Y5S2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC31.12■■■□□ 2.57
CDC42BPBQ9Y5S2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDC42BPBQ9Y5S2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CDC42BPBQ9Y5S2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CDC42BPBQ9Y5S2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC31.11■■■□□ 2.57
CDC42BPBQ9Y5S2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CDC42BPBQ9Y5S2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CDC42BPBQ9Y5S2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC31.11■■■□□ 2.57
CDC42BPBQ9Y5S2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CDC42BPBQ9Y5S2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC31.11■■■□□ 2.57
CDC42BPBQ9Y5S2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC31.11■■■□□ 2.57
CDC42BPBQ9Y5S2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CDC42BPBQ9Y5S2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CDC42BPBQ9Y5S2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC31.1■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms