Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 MIR2861-201ENST00000636310 90 ntBASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 FP700111.2-201ENST00000619190 1892 ntBASIC20.64■□□□□ 0.9
RAI2Q9Y5P3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
RAI2Q9Y5P3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAI2Q9Y5P3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RAI2Q9Y5P3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
RAI2Q9Y5P3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
RAI2Q9Y5P3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAI2Q9Y5P3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 CYP2T3P-201ENST00000601990 817 ntBASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 AC007225.1-201ENST00000566331 1836 ntBASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAI2Q9Y5P3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 AC087633.2-202ENST00000565166 1439 ntBASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
RAI2Q9Y5P3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAI2Q9Y5P3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 KRT18P68-201ENST00000392293 1000 ntBASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 SLC29A4P1-201ENST00000398760 971 ntBASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 PGM5P4-201ENST00000421970 445 ntBASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.61■□□□□ 0.89
RAI2Q9Y5P3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 AL121603.2-201ENST00000557373 2117 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms