Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB1Q9Y5G3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB1Q9Y5G3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
PCDHGB1Q9Y5G3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.64■□□□□ 0.58
PCDHGB1Q9Y5G3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGB1Q9Y5G3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.64■□□□□ 0.58
PCDHGB1Q9Y5G3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGB1Q9Y5G3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 PBX2P1-201ENST00000493219 1291 ntBASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 AC142381.2-201ENST00000566120 298 ntBASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 AC136469.2-201ENST00000623944 1028 ntBASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 AL158211.5-201ENST00000623583 2518 ntBASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 SYT6-210ENST00000641643 1587 ntBASIC18.64■□□□□ 0.57
PCDHGB1Q9Y5G3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 AL512631.2-201ENST00000604634 923 ntBASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB1Q9Y5G3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 AC011298.3-201ENST00000615796 283 ntBASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 AC005332.7-201ENST00000614046 2005 ntBASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGB1Q9Y5G3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms