Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ERGIC3Q9Y282 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ERGIC3Q9Y282 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERGIC3Q9Y282 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.58■□□□□ 0.57
ERGIC3Q9Y282 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.58■□□□□ 0.57
ERGIC3Q9Y282 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ERGIC3Q9Y282 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ERGIC3Q9Y282 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERGIC3Q9Y282 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ERGIC3Q9Y282 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERGIC3Q9Y282 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERGIC3Q9Y282 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERGIC3Q9Y282 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ERGIC3Q9Y282 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.58■□□□□ 0.56
ERGIC3Q9Y282 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERGIC3Q9Y282 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.58■□□□□ 0.56
ERGIC3Q9Y282 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.58■□□□□ 0.56
ERGIC3Q9Y282 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ERGIC3Q9Y282 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERGIC3Q9Y282 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERGIC3Q9Y282 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERGIC3Q9Y282 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 MIR6724-1-201ENST00000616420 92 ntBASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 MIR6724-2-201ENST00000616483 92 ntBASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 MIR6724-4-201ENST00000617390 92 ntBASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 MIR6724-3-201ENST00000622482 92 ntBASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.56■□□□□ 0.56
ERGIC3Q9Y282 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 AC010525.1-201ENST00000585559 441 ntBASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ERGIC3Q9Y282 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ERGIC3Q9Y282 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ERGIC3Q9Y282 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ERGIC3Q9Y282 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ERGIC3Q9Y282 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERGIC3Q9Y282 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
ERGIC3Q9Y282 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.54■□□□□ 0.56
ERGIC3Q9Y282 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ERGIC3Q9Y282 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.54■□□□□ 0.56
ERGIC3Q9Y282 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ERGIC3Q9Y282 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.54■□□□□ 0.56
ERGIC3Q9Y282 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.54■□□□□ 0.56
ERGIC3Q9Y282 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.54■□□□□ 0.56
ERGIC3Q9Y282 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms