Protein–RNA interactions for Protein: Q9NXJ0

MS4A12, Membrane-spanning 4-domains subfamily A member 12, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A12Q9NXJ0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A12Q9NXJ0 AC068338.2-201ENST00000563278 1430 ntBASIC19.42■□□□□ 0.7
MS4A12Q9NXJ0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A12Q9NXJ0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A12Q9NXJ0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MS4A12Q9NXJ0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
MS4A12Q9NXJ0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A12Q9NXJ0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.42■□□□□ 0.7
MS4A12Q9NXJ0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.42■□□□□ 0.7
MS4A12Q9NXJ0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MS4A12Q9NXJ0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A12Q9NXJ0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A12Q9NXJ0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 AC069236.1-201ENST00000604339 616 ntBASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 AC092666.2-201ENST00000613287 246 ntBASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 AC008694.1-202ENST00000636953 945 ntBASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 AC027702.1-201ENST00000563810 1770 ntBASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A12Q9NXJ0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 AC073111.5-205ENST00000641717 521 ntBASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A12Q9NXJ0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A12Q9NXJ0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A12Q9NXJ0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A12Q9NXJ0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A12Q9NXJ0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A12Q9NXJ0 PGM5P4-201ENST00000421970 445 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms