Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF216Q9NWF9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF216Q9NWF9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
RNF216Q9NWF9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF216Q9NWF9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF216Q9NWF9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF216Q9NWF9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF216Q9NWF9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF216Q9NWF9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF216Q9NWF9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 MFSD8-213ENST00000641134 1327 ntBASIC23.17■■□□□ 1.3
RNF216Q9NWF9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 AL158050.2-201ENST00000605336 568 ntBASIC23.17■■□□□ 1.3
RNF216Q9NWF9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.17■■□□□ 1.3
RNF216Q9NWF9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.16■■□□□ 1.3
RNF216Q9NWF9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF216Q9NWF9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF216Q9NWF9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RNF216Q9NWF9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF216Q9NWF9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RNF216Q9NWF9 CNN2P6-201ENST00000439038 900 ntBASIC23.16■■□□□ 1.3
RNF216Q9NWF9 TERF1P5-201ENST00000477545 1207 ntBASIC23.16■■□□□ 1.3
RNF216Q9NWF9 KATNBL1P4-201ENST00000503545 918 ntBASIC23.16■■□□□ 1.3
RNF216Q9NWF9 AC007322.4-201ENST00000509611 723 ntBASIC23.16■■□□□ 1.3
RNF216Q9NWF9 KRT18P6-201ENST00000555540 1265 ntBASIC23.16■■□□□ 1.3
RNF216Q9NWF9 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC23.16■■□□□ 1.3
RNF216Q9NWF9 AC008175.2-201ENST00000612840 297 ntBASIC23.16■■□□□ 1.3
RNF216Q9NWF9 AP000720.1-201ENST00000625091 483 ntBASIC23.16■■□□□ 1.3
RNF216Q9NWF9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF216Q9NWF9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
RNF216Q9NWF9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF216Q9NWF9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF216Q9NWF9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.16■■□□□ 1.3
RNF216Q9NWF9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 AP006587.3-201ENST00000525742 1516 ntBASIC23.15■■□□□ 1.3
RNF216Q9NWF9 OR2X1P-201ENST00000421144 687 ntBASIC23.15■■□□□ 1.3
RNF216Q9NWF9 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 HLA-F-220ENST00000434407 884 ntBASIC23.15■■□□□ 1.3
RNF216Q9NWF9 GUSBP6-202ENST00000438529 1198 ntBASIC23.15■■□□□ 1.3
RNF216Q9NWF9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 AC087762.1-201ENST00000559755 643 ntTSL 3 BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 AC105036.2-201ENST00000569468 176 ntBASIC23.15■■□□□ 1.3
RNF216Q9NWF9 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF216Q9NWF9 CASC19-229ENST00000641418 1373 ntBASIC23.14■■□□□ 1.3
RNF216Q9NWF9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RNF216Q9NWF9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RNF216Q9NWF9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RNF216Q9NWF9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.14■■□□□ 1.3
RNF216Q9NWF9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF216Q9NWF9 MTND2P15-201ENST00000418575 892 ntBASIC23.14■■□□□ 1.29
RNF216Q9NWF9 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RNF216Q9NWF9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RNF216Q9NWF9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF216Q9NWF9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.14■■□□□ 1.29
RNF216Q9NWF9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF216Q9NWF9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RNF216Q9NWF9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF216Q9NWF9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RNF216Q9NWF9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RNF216Q9NWF9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 AC069152.1-201ENST00000438030 544 ntBASIC23.13■■□□□ 1.29
RNF216Q9NWF9 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC23.13■■□□□ 1.29
RNF216Q9NWF9 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms