Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.7■■□□□ 1.23
ATP6V0A4Q9HBG4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.7■■□□□ 1.23
ATP6V0A4Q9HBG4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
ATP6V0A4Q9HBG4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ATP6V0A4Q9HBG4 AC027702.1-201ENST00000563810 1770 ntBASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATP6V0A4Q9HBG4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP6V0A4Q9HBG4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ATP6V0A4Q9HBG4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP6V0A4Q9HBG4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP6V0A4Q9HBG4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ATP6V0A4Q9HBG4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.67■■□□□ 1.22
ATP6V0A4Q9HBG4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
ATP6V0A4Q9HBG4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP6V0A4Q9HBG4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.67■■□□□ 1.22
ATP6V0A4Q9HBG4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP6V0A4Q9HBG4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 PRORSD1P-201ENST00000295112 541 ntBASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 ESRRAP1-201ENST00000400596 1257 ntBASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 AL356652.1-201ENST00000615962 565 ntBASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V0A4Q9HBG4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V0A4Q9HBG4 PLK5-205ENST00000642079 1969 ntBASIC22.65■■□□□ 1.22
ATP6V0A4Q9HBG4 AC005229.4-201ENST00000610085 2198 ntBASIC22.65■■□□□ 1.22
ATP6V0A4Q9HBG4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V0A4Q9HBG4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.65■■□□□ 1.22
ATP6V0A4Q9HBG4 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.65■■□□□ 1.22
ATP6V0A4Q9HBG4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
ATP6V0A4Q9HBG4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V0A4Q9HBG4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V0A4Q9HBG4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.65■■□□□ 1.22
ATP6V0A4Q9HBG4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V0A4Q9HBG4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
ATP6V0A4Q9HBG4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ATP6V0A4Q9HBG4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ATP6V0A4Q9HBG4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.64■■□□□ 1.22
ATP6V0A4Q9HBG4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ATP6V0A4Q9HBG4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ATP6V0A4Q9HBG4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
ATP6V0A4Q9HBG4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.64■■□□□ 1.22
ATP6V0A4Q9HBG4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms