Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.63■□□□□ 0.89
LRFN3Q9BTN0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.63■□□□□ 0.89
LRFN3Q9BTN0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.63■□□□□ 0.89
LRFN3Q9BTN0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 YBX1P2-201ENST00000489612 999 ntBASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 AC069148.1-201ENST00000608741 768 ntBASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 FAM87A-204ENST00000613235 858 ntBASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.62■□□□□ 0.89
LRFN3Q9BTN0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN3Q9BTN0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN3Q9BTN0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN3Q9BTN0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.61■□□□□ 0.89
LRFN3Q9BTN0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.61■□□□□ 0.89
LRFN3Q9BTN0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.61■□□□□ 0.89
LRFN3Q9BTN0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.61■□□□□ 0.89
LRFN3Q9BTN0 RN7SL510P-201ENST00000581311 263 ntBASIC20.61■□□□□ 0.89
LRFN3Q9BTN0 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.61■□□□□ 0.89
LRFN3Q9BTN0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.61■□□□□ 0.89
LRFN3Q9BTN0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN3Q9BTN0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN3Q9BTN0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.6■□□□□ 0.89
LRFN3Q9BTN0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.6■□□□□ 0.89
LRFN3Q9BTN0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LRFN3Q9BTN0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.6■□□□□ 0.89
LRFN3Q9BTN0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.6■□□□□ 0.89
LRFN3Q9BTN0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.6■□□□□ 0.89
LRFN3Q9BTN0 AC116407.4-201ENST00000623319 1061 ntBASIC20.6■□□□□ 0.89
LRFN3Q9BTN0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN3Q9BTN0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN3Q9BTN0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN3Q9BTN0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.6■□□□□ 0.89
LRFN3Q9BTN0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 PGM5P4-201ENST00000421970 445 ntBASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 KSR1P1-201ENST00000446298 240 ntBASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 AC004264.1-201ENST00000608354 794 ntBASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 KRT8P10-201ENST00000450021 1447 ntBASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LRFN3Q9BTN0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.58■□□□□ 0.89
LRFN3Q9BTN0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.58■□□□□ 0.89
LRFN3Q9BTN0 AC022211.4-201ENST00000625094 2161 ntBASIC20.58■□□□□ 0.89
LRFN3Q9BTN0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.58■□□□□ 0.89
LRFN3Q9BTN0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.58■□□□□ 0.89
LRFN3Q9BTN0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.58■□□□□ 0.89
LRFN3Q9BTN0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN3Q9BTN0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN3Q9BTN0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN3Q9BTN0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN3Q9BTN0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRFN3Q9BTN0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.58■□□□□ 0.88
LRFN3Q9BTN0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRFN3Q9BTN0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.58■□□□□ 0.88
LRFN3Q9BTN0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.58■□□□□ 0.88
LRFN3Q9BTN0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRFN3Q9BTN0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.58■□□□□ 0.88
LRFN3Q9BTN0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.58■□□□□ 0.88
LRFN3Q9BTN0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN3Q9BTN0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.57■□□□□ 0.88
LRFN3Q9BTN0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.57■□□□□ 0.88
LRFN3Q9BTN0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN3Q9BTN0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN3Q9BTN0 INGX-201ENST00000359239 846 ntBASIC20.57■□□□□ 0.88
LRFN3Q9BTN0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN3Q9BTN0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN3Q9BTN0 KRT16P1-201ENST00000399124 1418 ntBASIC20.57■□□□□ 0.88
LRFN3Q9BTN0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.57■□□□□ 0.88
LRFN3Q9BTN0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LRFN3Q9BTN0 AL139125.2-201ENST00000623134 1869 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms