Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCM2Q9BSQ5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.08■□□□□ 0.81
CCM2Q9BSQ5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.08■□□□□ 0.81
CCM2Q9BSQ5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.08■□□□□ 0.81
CCM2Q9BSQ5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.08■□□□□ 0.81
CCM2Q9BSQ5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCM2Q9BSQ5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
CCM2Q9BSQ5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCM2Q9BSQ5 GUSBP6-202ENST00000438529 1198 ntBASIC20.08■□□□□ 0.81
CCM2Q9BSQ5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.08■□□□□ 0.81
CCM2Q9BSQ5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
CCM2Q9BSQ5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.08■□□□□ 0.81
CCM2Q9BSQ5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.08■□□□□ 0.81
CCM2Q9BSQ5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCM2Q9BSQ5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.08■□□□□ 0.8
CCM2Q9BSQ5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
CCM2Q9BSQ5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.08■□□□□ 0.8
CCM2Q9BSQ5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCM2Q9BSQ5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 AL356652.1-201ENST00000615962 565 ntBASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCM2Q9BSQ5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 BX276092.2-201ENST00000417668 665 ntBASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCM2Q9BSQ5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 KRT8P36-201ENST00000489121 1440 ntBASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 LSM12P1-201ENST00000411836 588 ntBASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 MIPEPP3-201ENST00000412105 444 ntBASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 MIR4758-201ENST00000577688 71 ntBASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 AL589743.5-201ENST00000616611 1050 ntBASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCM2Q9BSQ5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms