Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 AC006128.1-201ENST00000624704 1661 ntBASIC21.05■□□□□ 0.96
RPRD1AQ96P16 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 AL356652.1-201ENST00000615962 565 ntBASIC21.05■□□□□ 0.96
RPRD1AQ96P16 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.05■□□□□ 0.96
RPRD1AQ96P16 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 AC091874.3-201ENST00000512672 1195 ntBASIC21.04■□□□□ 0.96
RPRD1AQ96P16 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.04■□□□□ 0.96
RPRD1AQ96P16 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 AC097658.1-201ENST00000475555 843 ntBASIC21.03■□□□□ 0.96
RPRD1AQ96P16 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 MIR2861-201ENST00000636310 90 ntBASIC21.03■□□□□ 0.96
RPRD1AQ96P16 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.03■□□□□ 0.96
RPRD1AQ96P16 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPRD1AQ96P16 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.02■□□□□ 0.95
RPRD1AQ96P16 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RPRD1AQ96P16 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPRD1AQ96P16 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.01■□□□□ 0.95
RPRD1AQ96P16 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPRD1AQ96P16 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.01■□□□□ 0.95
RPRD1AQ96P16 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPRD1AQ96P16 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RPRD1AQ96P16 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
RPRD1AQ96P16 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPRD1AQ96P16 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPRD1AQ96P16 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPRD1AQ96P16 FP700111.2-201ENST00000619190 1892 ntBASIC21.01■□□□□ 0.95
RPRD1AQ96P16 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
RPRD1AQ96P16 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPRD1AQ96P16 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms