Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 IGHV3-19-201ENST00000521488 291 ntBASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.22■□□□□ 0.67
NSMCE2Q96MF7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 AC126544.1-201ENST00000580842 1059 ntBASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 BX323043.1-201ENST00000641006 1765 ntBASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NSMCE2Q96MF7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 AC061975.6-201ENST00000579045 1553 ntBASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 AC233992.3-201ENST00000607491 485 ntBASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NSMCE2Q96MF7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 EEF1DP3-203ENST00000566025 782 ntBASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 AC053503.5-201ENST00000601508 636 ntBASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NSMCE2Q96MF7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 AC105233.4-201ENST00000642045 216 ntBASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NSMCE2Q96MF7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms