Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC3Q96DC8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
ECHDC3Q96DC8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ECHDC3Q96DC8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 AL121603.2-201ENST00000557373 2117 ntBASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 C2orf69P4-201ENST00000565394 541 ntBASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ECHDC3Q96DC8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ECHDC3Q96DC8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ECHDC3Q96DC8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ECHDC3Q96DC8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ECHDC3Q96DC8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ECHDC3Q96DC8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ECHDC3Q96DC8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.45■□□□□ 0.86
ECHDC3Q96DC8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.45■□□□□ 0.86
ECHDC3Q96DC8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ECHDC3Q96DC8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ECHDC3Q96DC8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ECHDC3Q96DC8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 AC007225.1-201ENST00000566331 1836 ntBASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.44■□□□□ 0.86
ECHDC3Q96DC8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.43■□□□□ 0.86
ECHDC3Q96DC8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 FP700111.2-201ENST00000619190 1892 ntBASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC3Q96DC8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms