Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 AC138907.5-202ENST00000569484 235 ntBASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 AL031432.3-201ENST00000607698 485 ntBASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4Y2Q8TD47 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 MIR939-201ENST00000401314 82 ntBASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 AC245052.3-201ENST00000450182 901 ntBASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4Y2Q8TD47 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 KRT87P-202ENST00000534226 1464 ntBASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 RASA4CP-201ENST00000424092 1398 ntBASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 AL136967.2-201ENST00000623968 743 ntBASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 AC116050.2-201ENST00000612102 1779 ntBASIC17.84■□□□□ 0.45
RPS4Y2Q8TD47 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
RPS4Y2Q8TD47 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPS4Y2Q8TD47 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
RPS4Y2Q8TD47 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RPS4Y2Q8TD47 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.83■□□□□ 0.45
RPS4Y2Q8TD47 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RPS4Y2Q8TD47 AC116562.4-201ENST00000641316 2276 ntBASIC17.83■□□□□ 0.45
RPS4Y2Q8TD47 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.83■□□□□ 0.45
RPS4Y2Q8TD47 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RPS4Y2Q8TD47 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPS4Y2Q8TD47 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPS4Y2Q8TD47 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPS4Y2Q8TD47 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.83■□□□□ 0.44
RPS4Y2Q8TD47 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.83■□□□□ 0.44
RPS4Y2Q8TD47 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.83■□□□□ 0.44
RPS4Y2Q8TD47 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RPS4Y2Q8TD47 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms