Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.64■■□□□ 1.05
UBA3Q8TBC4 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.64■■□□□ 1.05
UBA3Q8TBC4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBA3Q8TBC4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBA3Q8TBC4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBA3Q8TBC4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 GUSBP6-202ENST00000438529 1198 ntBASIC21.63■■□□□ 1.05
UBA3Q8TBC4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 AC100791.3-201ENST00000617619 330 ntBASIC21.63■■□□□ 1.05
UBA3Q8TBC4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.63■■□□□ 1.05
UBA3Q8TBC4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 TSPY6P-201ENST00000448518 926 ntBASIC21.62■■□□□ 1.05
UBA3Q8TBC4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 CYP2T3P-201ENST00000601990 817 ntBASIC21.62■■□□□ 1.05
UBA3Q8TBC4 AL109923.1-201ENST00000618799 583 ntBASIC21.62■■□□□ 1.05
UBA3Q8TBC4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBA3Q8TBC4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 KRT17P1-201ENST00000399211 1546 ntBASIC21.61■■□□□ 1.05
UBA3Q8TBC4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBA3Q8TBC4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 KRT18P68-201ENST00000392293 1000 ntBASIC21.6■■□□□ 1.05
UBA3Q8TBC4 BX276092.2-201ENST00000417668 665 ntBASIC21.6■■□□□ 1.05
UBA3Q8TBC4 HLA-L-209ENST00000420110 1011 ntBASIC21.6■■□□□ 1.05
UBA3Q8TBC4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 AC087633.2-202ENST00000565166 1439 ntBASIC21.6■■□□□ 1.05
UBA3Q8TBC4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBA3Q8TBC4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 MIPEPP3-201ENST00000412105 444 ntBASIC21.59■■□□□ 1.05
UBA3Q8TBC4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms