Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TTC39CQ8N584 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TTC39CQ8N584 BX276092.2-201ENST00000417668 665 ntBASIC21.72■■□□□ 1.07
TTC39CQ8N584 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
TTC39CQ8N584 GUSBP6-202ENST00000438529 1198 ntBASIC21.72■■□□□ 1.07
TTC39CQ8N584 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.72■■□□□ 1.07
TTC39CQ8N584 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.72■■□□□ 1.07
TTC39CQ8N584 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.72■■□□□ 1.07
TTC39CQ8N584 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.72■■□□□ 1.07
TTC39CQ8N584 MIR4758-201ENST00000577688 71 ntBASIC21.72■■□□□ 1.07
TTC39CQ8N584 AC092118.2-201ENST00000613495 667 ntBASIC21.72■■□□□ 1.07
TTC39CQ8N584 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.72■■□□□ 1.07
TTC39CQ8N584 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TTC39CQ8N584 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.71■■□□□ 1.07
TTC39CQ8N584 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.71■■□□□ 1.07
TTC39CQ8N584 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39CQ8N584 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.71■■□□□ 1.07
TTC39CQ8N584 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
TTC39CQ8N584 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.71■■□□□ 1.07
TTC39CQ8N584 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39CQ8N584 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39CQ8N584 MIPEPP3-201ENST00000412105 444 ntBASIC21.71■■□□□ 1.07
TTC39CQ8N584 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39CQ8N584 AL355472.2-201ENST00000422958 438 ntBASIC21.71■■□□□ 1.07
TTC39CQ8N584 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.71■■□□□ 1.07
TTC39CQ8N584 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39CQ8N584 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39CQ8N584 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39CQ8N584 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.71■■□□□ 1.07
TTC39CQ8N584 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
TTC39CQ8N584 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.7■■□□□ 1.07
TTC39CQ8N584 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC39CQ8N584 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC39CQ8N584 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC39CQ8N584 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TTC39CQ8N584 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TTC39CQ8N584 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.7■■□□□ 1.06
TTC39CQ8N584 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC39CQ8N584 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
TTC39CQ8N584 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TTC39CQ8N584 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TTC39CQ8N584 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC39CQ8N584 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39CQ8N584 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39CQ8N584 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TTC39CQ8N584 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39CQ8N584 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.69■■□□□ 1.06
TTC39CQ8N584 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.69■■□□□ 1.06
TTC39CQ8N584 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39CQ8N584 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TTC39CQ8N584 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.69■■□□□ 1.06
TTC39CQ8N584 AC073210.2-201ENST00000430369 194 ntBASIC21.69■■□□□ 1.06
TTC39CQ8N584 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39CQ8N584 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39CQ8N584 AC104771.1-201ENST00000603335 964 ntBASIC21.69■■□□□ 1.06
TTC39CQ8N584 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39CQ8N584 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39CQ8N584 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39CQ8N584 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39CQ8N584 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TTC39CQ8N584 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
TTC39CQ8N584 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39CQ8N584 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39CQ8N584 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39CQ8N584 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39CQ8N584 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39CQ8N584 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.68■■□□□ 1.06
TTC39CQ8N584 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39CQ8N584 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.68■■□□□ 1.06
TTC39CQ8N584 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39CQ8N584 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39CQ8N584 ID1-201ENST00000376105 1233 ntBASIC21.68■■□□□ 1.06
TTC39CQ8N584 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39CQ8N584 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TTC39CQ8N584 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.68■■□□□ 1.06
TTC39CQ8N584 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TTC39CQ8N584 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.68■■□□□ 1.06
TTC39CQ8N584 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.68■■□□□ 1.06
TTC39CQ8N584 KRT17P1-201ENST00000399211 1546 ntBASIC21.68■■□□□ 1.06
TTC39CQ8N584 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39CQ8N584 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.68■■□□□ 1.06
TTC39CQ8N584 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39CQ8N584 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC39CQ8N584 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TTC39CQ8N584 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC39CQ8N584 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TTC39CQ8N584 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC39CQ8N584 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC39CQ8N584 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TTC39CQ8N584 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms