Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APLFQ8IW19 AC009237.3-201ENST00000393279 1427 ntBASIC20.12■□□□□ 0.81
APLFQ8IW19 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
APLFQ8IW19 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.12■□□□□ 0.81
APLFQ8IW19 AFG3L1P-217ENST00000557444 2447 ntBASIC20.12■□□□□ 0.81
APLFQ8IW19 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
APLFQ8IW19 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.12■□□□□ 0.81
APLFQ8IW19 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APLFQ8IW19 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.12■□□□□ 0.81
APLFQ8IW19 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.12■□□□□ 0.81
APLFQ8IW19 MFSD11-216ENST00000590393 1141 ntBASIC20.12■□□□□ 0.81
APLFQ8IW19 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.12■□□□□ 0.81
APLFQ8IW19 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APLFQ8IW19 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
APLFQ8IW19 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
APLFQ8IW19 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
APLFQ8IW19 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
APLFQ8IW19 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
APLFQ8IW19 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.11■□□□□ 0.81
APLFQ8IW19 AC005224.4-201ENST00000583262 1652 ntBASIC20.11■□□□□ 0.81
APLFQ8IW19 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
APLFQ8IW19 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
APLFQ8IW19 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.11■□□□□ 0.81
APLFQ8IW19 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
APLFQ8IW19 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
APLFQ8IW19 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
APLFQ8IW19 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
APLFQ8IW19 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
APLFQ8IW19 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
APLFQ8IW19 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
APLFQ8IW19 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
APLFQ8IW19 KRT87P-202ENST00000534226 1464 ntBASIC20.11■□□□□ 0.81
APLFQ8IW19 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
APLFQ8IW19 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
APLFQ8IW19 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
APLFQ8IW19 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
APLFQ8IW19 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
APLFQ8IW19 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
APLFQ8IW19 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
APLFQ8IW19 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.1■□□□□ 0.81
APLFQ8IW19 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.1■□□□□ 0.81
APLFQ8IW19 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
APLFQ8IW19 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
APLFQ8IW19 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
APLFQ8IW19 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
APLFQ8IW19 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
APLFQ8IW19 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.1■□□□□ 0.81
APLFQ8IW19 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
APLFQ8IW19 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
APLFQ8IW19 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
APLFQ8IW19 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
APLFQ8IW19 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
APLFQ8IW19 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
APLFQ8IW19 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
APLFQ8IW19 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
APLFQ8IW19 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.09■□□□□ 0.81
APLFQ8IW19 AC142086.2-201ENST00000569753 217 ntBASIC20.09■□□□□ 0.81
APLFQ8IW19 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.09■□□□□ 0.81
APLFQ8IW19 AC231657.2-201ENST00000624556 255 ntBASIC20.09■□□□□ 0.81
APLFQ8IW19 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
APLFQ8IW19 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
APLFQ8IW19 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
APLFQ8IW19 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.09■□□□□ 0.81
APLFQ8IW19 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
APLFQ8IW19 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
APLFQ8IW19 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
APLFQ8IW19 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
APLFQ8IW19 LINC01960-201ENST00000563759 1884 ntBASIC20.09■□□□□ 0.81
APLFQ8IW19 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
APLFQ8IW19 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
APLFQ8IW19 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
APLFQ8IW19 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
APLFQ8IW19 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
APLFQ8IW19 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
APLFQ8IW19 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
APLFQ8IW19 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
APLFQ8IW19 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APLFQ8IW19 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APLFQ8IW19 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APLFQ8IW19 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
APLFQ8IW19 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APLFQ8IW19 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.08■□□□□ 0.81
APLFQ8IW19 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
APLFQ8IW19 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.08■□□□□ 0.81
APLFQ8IW19 AC104187.1-201ENST00000607510 612 ntBASIC20.08■□□□□ 0.81
APLFQ8IW19 AL121832.2-201ENST00000610979 668 ntBASIC20.08■□□□□ 0.81
APLFQ8IW19 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
APLFQ8IW19 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
APLFQ8IW19 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.08■□□□□ 0.8
APLFQ8IW19 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APLFQ8IW19 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APLFQ8IW19 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APLFQ8IW19 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APLFQ8IW19 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APLFQ8IW19 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
APLFQ8IW19 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
APLFQ8IW19 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APLFQ8IW19 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
APLFQ8IW19 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APLFQ8IW19 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms