Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD2Q8IV50 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 AL031848.2-201ENST00000607670 837 ntBASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.91■□□□□ 0.46
LYSMD2Q8IV50 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 AC092028.1-203ENST00000608262 953 ntBASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 AL138781.2-201ENST00000617896 1843 ntBASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD2Q8IV50 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LYSMD2Q8IV50 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LYSMD2Q8IV50 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD2Q8IV50 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms