Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.33■■□□□ 1.33
COL13A1Q5TAT6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL13A1Q5TAT6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.33■■□□□ 1.33
COL13A1Q5TAT6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
COL13A1Q5TAT6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL13A1Q5TAT6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL13A1Q5TAT6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL13A1Q5TAT6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.33■■□□□ 1.32
COL13A1Q5TAT6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL13A1Q5TAT6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
COL13A1Q5TAT6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL13A1Q5TAT6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
COL13A1Q5TAT6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
COL13A1Q5TAT6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL13A1Q5TAT6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
COL13A1Q5TAT6 FXN-203ENST00000396366 922 ntTSL 2 BASIC23.32■■□□□ 1.32
COL13A1Q5TAT6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.32■■□□□ 1.32
COL13A1Q5TAT6 AC079776.4-201ENST00000511039 504 ntBASIC23.32■■□□□ 1.32
COL13A1Q5TAT6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.32■■□□□ 1.32
COL13A1Q5TAT6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.32■■□□□ 1.32
COL13A1Q5TAT6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.32■■□□□ 1.32
COL13A1Q5TAT6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 AL359075.1-203ENST00000462729 1002 ntBASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 AL121829.2-201ENST00000620908 328 ntBASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
COL13A1Q5TAT6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 VENTXP5-201ENST00000523979 775 ntBASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL13A1Q5TAT6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL13A1Q5TAT6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL13A1Q5TAT6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL13A1Q5TAT6 MIR1233-2-201ENST00000408138 82 ntBASIC23.29■■□□□ 1.32
COL13A1Q5TAT6 MIR1233-1-201ENST00000408722 82 ntBASIC23.29■■□□□ 1.32
COL13A1Q5TAT6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL13A1Q5TAT6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC23.29■■□□□ 1.32
COL13A1Q5TAT6 AP005242.2-201ENST00000580065 1175 ntBASIC23.29■■□□□ 1.32
COL13A1Q5TAT6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.29■■□□□ 1.32
COL13A1Q5TAT6 AC104692.2-201ENST00000603054 253 ntBASIC23.29■■□□□ 1.32
COL13A1Q5TAT6 AC092119.3-201ENST00000612618 583 ntBASIC23.29■■□□□ 1.32
COL13A1Q5TAT6 AL031008.1-201ENST00000619963 541 ntBASIC23.29■■□□□ 1.32
COL13A1Q5TAT6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL13A1Q5TAT6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 KSR1P1-201ENST00000446298 240 ntBASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 HOMER2P1-201ENST00000455653 964 ntBASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
COL13A1Q5TAT6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL13A1Q5TAT6 KRT16P1-201ENST00000399124 1418 ntBASIC23.27■■□□□ 1.32
COL13A1Q5TAT6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL13A1Q5TAT6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL13A1Q5TAT6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL13A1Q5TAT6 AC245052.3-201ENST00000450182 901 ntBASIC23.27■■□□□ 1.32
COL13A1Q5TAT6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL13A1Q5TAT6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.27■■□□□ 1.32
COL13A1Q5TAT6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.27■■□□□ 1.32
COL13A1Q5TAT6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.27■■□□□ 1.32
COL13A1Q5TAT6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL13A1Q5TAT6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL13A1Q5TAT6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL13A1Q5TAT6 KRT8P8-201ENST00000434750 1448 ntBASIC23.26■■□□□ 1.31
COL13A1Q5TAT6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL13A1Q5TAT6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL13A1Q5TAT6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL13A1Q5TAT6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.26■■□□□ 1.31
COL13A1Q5TAT6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
COL13A1Q5TAT6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.26■■□□□ 1.31
COL13A1Q5TAT6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL13A1Q5TAT6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms