Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CBWD6Q4V339 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CBWD6Q4V339 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.09■■□□□ 1.13
CBWD6Q4V339 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
CBWD6Q4V339 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CBWD6Q4V339 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CBWD6Q4V339 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CBWD6Q4V339 KRT8P36-201ENST00000489121 1440 ntBASIC22.09■■□□□ 1.13
CBWD6Q4V339 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CBWD6Q4V339 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CBWD6Q4V339 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CBWD6Q4V339 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.09■■□□□ 1.13
CBWD6Q4V339 AC231657.2-201ENST00000624556 255 ntBASIC22.09■■□□□ 1.13
CBWD6Q4V339 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CBWD6Q4V339 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CBWD6Q4V339 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CBWD6Q4V339 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CBWD6Q4V339 PKD1P6-201ENST00000343738 4769 ntBASIC22.09■■□□□ 1.13
CBWD6Q4V339 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CBWD6Q4V339 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CBWD6Q4V339 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CBWD6Q4V339 CYP21A1P-202ENST00000354927 1481 ntBASIC22.09■■□□□ 1.13
CBWD6Q4V339 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CBWD6Q4V339 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CBWD6Q4V339 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CBWD6Q4V339 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.08■■□□□ 1.13
CBWD6Q4V339 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.08■■□□□ 1.13
CBWD6Q4V339 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CBWD6Q4V339 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CBWD6Q4V339 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.08■■□□□ 1.13
CBWD6Q4V339 AC092720.2-201ENST00000602388 1665 ntBASIC22.08■■□□□ 1.13
CBWD6Q4V339 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
CBWD6Q4V339 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CBWD6Q4V339 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CBWD6Q4V339 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.08■■□□□ 1.13
CBWD6Q4V339 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CBWD6Q4V339 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
CBWD6Q4V339 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CBWD6Q4V339 CYP2T1P-201ENST00000432607 1285 ntBASIC22.08■■□□□ 1.13
CBWD6Q4V339 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.08■■□□□ 1.13
CBWD6Q4V339 RARRES2P4-201ENST00000514074 484 ntBASIC22.08■■□□□ 1.13
CBWD6Q4V339 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CBWD6Q4V339 AL137784.2-201ENST00000607332 1000 ntBASIC22.08■■□□□ 1.13
CBWD6Q4V339 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.08■■□□□ 1.13
CBWD6Q4V339 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CBWD6Q4V339 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CBWD6Q4V339 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CBWD6Q4V339 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CBWD6Q4V339 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.08■■□□□ 1.12
CBWD6Q4V339 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CBWD6Q4V339 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CBWD6Q4V339 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.07■■□□□ 1.12
CBWD6Q4V339 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CBWD6Q4V339 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CBWD6Q4V339 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CBWD6Q4V339 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CBWD6Q4V339 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CBWD6Q4V339 AC007322.1-201ENST00000426983 750 ntBASIC22.07■■□□□ 1.12
CBWD6Q4V339 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.07■■□□□ 1.12
CBWD6Q4V339 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.07■■□□□ 1.12
CBWD6Q4V339 AC080038.1-201ENST00000611274 1154 ntBASIC22.07■■□□□ 1.12
CBWD6Q4V339 AC073111.5-205ENST00000641717 521 ntBASIC22.07■■□□□ 1.12
CBWD6Q4V339 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CBWD6Q4V339 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CBWD6Q4V339 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.07■■□□□ 1.12
CBWD6Q4V339 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CBWD6Q4V339 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CBWD6Q4V339 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
CBWD6Q4V339 AL162377.1-201ENST00000618844 1793 ntBASIC22.07■■□□□ 1.12
CBWD6Q4V339 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CBWD6Q4V339 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.07■■□□□ 1.12
CBWD6Q4V339 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CBWD6Q4V339 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
CBWD6Q4V339 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.06■■□□□ 1.12
CBWD6Q4V339 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.06■■□□□ 1.12
CBWD6Q4V339 CDCA4P2-201ENST00000441182 718 ntBASIC22.06■■□□□ 1.12
CBWD6Q4V339 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
CBWD6Q4V339 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CBWD6Q4V339 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
CBWD6Q4V339 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CBWD6Q4V339 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.06■■□□□ 1.12
CBWD6Q4V339 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CBWD6Q4V339 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CBWD6Q4V339 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.06■■□□□ 1.12
CBWD6Q4V339 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.06■■□□□ 1.12
CBWD6Q4V339 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
CBWD6Q4V339 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.06■■□□□ 1.12
CBWD6Q4V339 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.06■■□□□ 1.12
CBWD6Q4V339 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CBWD6Q4V339 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CBWD6Q4V339 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CBWD6Q4V339 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
CBWD6Q4V339 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CBWD6Q4V339 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CBWD6Q4V339 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CBWD6Q4V339 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
CBWD6Q4V339 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.05■■□□□ 1.12
CBWD6Q4V339 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.05■■□□□ 1.12
CBWD6Q4V339 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.05■■□□□ 1.12
CBWD6Q4V339 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms