Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 RARRES2P11-201ENST00000635158 484 ntBASIC18.79■□□□□ 0.6
SMIM11AP58511 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM11AP58511 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM11AP58511 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM11AP58511 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SMIM11AP58511 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM11AP58511 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.79■□□□□ 0.6
SMIM11AP58511 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM11AP58511 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM11AP58511 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SMIM11AP58511 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM11AP58511 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.78■□□□□ 0.6
SMIM11AP58511 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM11AP58511 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SMIM11AP58511 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.78■□□□□ 0.6
SMIM11AP58511 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.78■□□□□ 0.6
SMIM11AP58511 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.78■□□□□ 0.6
SMIM11AP58511 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM11AP58511 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM11AP58511 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.78■□□□□ 0.6
SMIM11AP58511 AC138907.5-202ENST00000569484 235 ntBASIC18.78■□□□□ 0.6
SMIM11AP58511 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM11AP58511 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.78■□□□□ 0.6
SMIM11AP58511 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM11AP58511 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SMIM11AP58511 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SMIM11AP58511 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM11AP58511 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SMIM11AP58511 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM11AP58511 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM11AP58511 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM11AP58511 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM11AP58511 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM11AP58511 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM11AP58511 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SMIM11AP58511 AC112907.3-201ENST00000577781 2400 ntBASIC18.77■□□□□ 0.6
SMIM11AP58511 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM11AP58511 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.77■□□□□ 0.6
SMIM11AP58511 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.77■□□□□ 0.6
SMIM11AP58511 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.77■□□□□ 0.6
SMIM11AP58511 AF213884.3-201ENST00000563833 479 ntBASIC18.77■□□□□ 0.6
SMIM11AP58511 AL358852.1-201ENST00000623174 1268 ntBASIC18.77■□□□□ 0.6
SMIM11AP58511 MIR2861-201ENST00000636310 90 ntBASIC18.77■□□□□ 0.6
SMIM11AP58511 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SMIM11AP58511 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM11AP58511 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM11AP58511 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMIM11AP58511 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMIM11AP58511 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SMIM11AP58511 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMIM11AP58511 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMIM11AP58511 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMIM11AP58511 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SMIM11AP58511 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM11AP58511 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM11AP58511 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM11AP58511 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM11AP58511 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SMIM11AP58511 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SMIM11AP58511 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM11AP58511 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SMIM11AP58511 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM11AP58511 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM11AP58511 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.76■□□□□ 0.59
SMIM11AP58511 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.76■□□□□ 0.59
SMIM11AP58511 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.76■□□□□ 0.59
SMIM11AP58511 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.76■□□□□ 0.59
SMIM11AP58511 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.76■□□□□ 0.59
SMIM11AP58511 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SMIM11AP58511 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM11AP58511 AC116050.2-201ENST00000612102 1779 ntBASIC18.76■□□□□ 0.59
SMIM11AP58511 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SMIM11AP58511 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM11AP58511 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.75■□□□□ 0.59
SMIM11AP58511 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM11AP58511 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SMIM11AP58511 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.75■□□□□ 0.59
SMIM11AP58511 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM11AP58511 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.75■□□□□ 0.59
SMIM11AP58511 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
SMIM11AP58511 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM11AP58511 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM11AP58511 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM11AP58511 TCF3P1-201ENST00000423021 1937 ntBASIC18.75■□□□□ 0.59
SMIM11AP58511 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.75■□□□□ 0.59
SMIM11AP58511 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.75■□□□□ 0.59
SMIM11AP58511 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.75■□□□□ 0.59
SMIM11AP58511 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM11AP58511 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM11AP58511 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM11AP58511 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.75■□□□□ 0.59
SMIM11AP58511 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM11AP58511 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM11AP58511 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM11AP58511 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM11AP58511 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SMIM11AP58511 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM11AP58511 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM11AP58511 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM11AP58511 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms