Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN2P57739 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.21■□□□□ 0.83
CLDN2P57739 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLDN2P57739 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CLDN2P57739 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN2P57739 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN2P57739 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN2P57739 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN2P57739 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN2P57739 AC011484.1-201ENST00000377652 1995 ntBASIC20.21■□□□□ 0.83
CLDN2P57739 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN2P57739 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN2P57739 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN2P57739 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.2■□□□□ 0.82
CLDN2P57739 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
CLDN2P57739 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN2P57739 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN2P57739 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.2■□□□□ 0.82
CLDN2P57739 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.2■□□□□ 0.82
CLDN2P57739 AL359736.2-201ENST00000621992 437 ntBASIC20.2■□□□□ 0.82
CLDN2P57739 AP006294.2-201ENST00000641667 209 ntBASIC20.2■□□□□ 0.82
CLDN2P57739 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN2P57739 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN2P57739 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLDN2P57739 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN2P57739 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN2P57739 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN2P57739 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLDN2P57739 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN2P57739 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN2P57739 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN2P57739 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN2P57739 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN2P57739 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN2P57739 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN2P57739 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.19■□□□□ 0.82
CLDN2P57739 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CLDN2P57739 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.19■□□□□ 0.82
CLDN2P57739 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.19■□□□□ 0.82
CLDN2P57739 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CLDN2P57739 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.19■□□□□ 0.82
CLDN2P57739 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.19■□□□□ 0.82
CLDN2P57739 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
CLDN2P57739 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN2P57739 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.19■□□□□ 0.82
CLDN2P57739 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN2P57739 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN2P57739 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN2P57739 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CLDN2P57739 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLDN2P57739 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN2P57739 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.18■□□□□ 0.82
CLDN2P57739 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN2P57739 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN2P57739 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLDN2P57739 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN2P57739 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.18■□□□□ 0.82
CLDN2P57739 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN2P57739 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN2P57739 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN2P57739 C1QBPP2-201ENST00000528754 825 ntBASIC20.18■□□□□ 0.82
CLDN2P57739 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLDN2P57739 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN2P57739 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN2P57739 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.18■□□□□ 0.82
CLDN2P57739 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.18■□□□□ 0.82
CLDN2P57739 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.18■□□□□ 0.82
CLDN2P57739 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.18■□□□□ 0.82
CLDN2P57739 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN2P57739 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN2P57739 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLDN2P57739 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN2P57739 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN2P57739 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLDN2P57739 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN2P57739 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN2P57739 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN2P57739 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN2P57739 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CLDN2P57739 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN2P57739 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN2P57739 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLDN2P57739 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CLDN2P57739 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN2P57739 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN2P57739 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.17■□□□□ 0.82
CLDN2P57739 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLDN2P57739 AC069544.1-201ENST00000609399 999 ntBASIC20.17■□□□□ 0.82
CLDN2P57739 AC006557.6-201ENST00000623071 864 ntBASIC20.17■□□□□ 0.82
CLDN2P57739 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN2P57739 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.17■□□□□ 0.82
CLDN2P57739 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN2P57739 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CLDN2P57739 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN2P57739 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN2P57739 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN2P57739 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN2P57739 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN2P57739 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN2P57739 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms