Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.95■□□□□ 0.46
CCR9P51686 RARRES2P11-201ENST00000635158 484 ntBASIC17.95■□□□□ 0.46
CCR9P51686 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCR9P51686 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.95■□□□□ 0.46
CCR9P51686 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCR9P51686 KRT16P2-201ENST00000414673 1423 ntBASIC17.95■□□□□ 0.46
CCR9P51686 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCR9P51686 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCR9P51686 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.95■□□□□ 0.46
CCR9P51686 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCR9P51686 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCR9P51686 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCR9P51686 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.94■□□□□ 0.46
CCR9P51686 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCR9P51686 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCR9P51686 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.94■□□□□ 0.46
CCR9P51686 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCR9P51686 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCR9P51686 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCR9P51686 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCR9P51686 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCR9P51686 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.94■□□□□ 0.46
CCR9P51686 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCR9P51686 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CCR9P51686 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.94■□□□□ 0.46
CCR9P51686 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.94■□□□□ 0.46
CCR9P51686 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.94■□□□□ 0.46
CCR9P51686 AF213884.3-201ENST00000563833 479 ntBASIC17.94■□□□□ 0.46
CCR9P51686 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCR9P51686 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CCR9P51686 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCR9P51686 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.94■□□□□ 0.46
CCR9P51686 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.94■□□□□ 0.46
CCR9P51686 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCR9P51686 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCR9P51686 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCR9P51686 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.93■□□□□ 0.46
CCR9P51686 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCR9P51686 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.93■□□□□ 0.46
CCR9P51686 AC245052.3-201ENST00000450182 901 ntBASIC17.93■□□□□ 0.46
CCR9P51686 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCR9P51686 AL136967.2-201ENST00000623968 743 ntBASIC17.93■□□□□ 0.46
CCR9P51686 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCR9P51686 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCR9P51686 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCR9P51686 KRT87P-202ENST00000534226 1464 ntBASIC17.93■□□□□ 0.46
CCR9P51686 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCR9P51686 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCR9P51686 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.93■□□□□ 0.46
CCR9P51686 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCR9P51686 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCR9P51686 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCR9P51686 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCR9P51686 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCR9P51686 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.92■□□□□ 0.46
CCR9P51686 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCR9P51686 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CCR9P51686 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCR9P51686 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCR9P51686 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCR9P51686 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.92■□□□□ 0.46
CCR9P51686 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCR9P51686 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.92■□□□□ 0.46
CCR9P51686 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.92■□□□□ 0.46
CCR9P51686 AC138907.5-202ENST00000569484 235 ntBASIC17.92■□□□□ 0.46
CCR9P51686 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCR9P51686 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCR9P51686 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.92■□□□□ 0.46
CCR9P51686 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCR9P51686 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCR9P51686 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCR9P51686 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCR9P51686 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.91■□□□□ 0.46
CCR9P51686 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCR9P51686 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCR9P51686 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCR9P51686 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CCR9P51686 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCR9P51686 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCR9P51686 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.91■□□□□ 0.46
CCR9P51686 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCR9P51686 AC120498.10-201ENST00000621827 505 ntBASIC17.91■□□□□ 0.46
CCR9P51686 AL358852.1-201ENST00000623174 1268 ntBASIC17.91■□□□□ 0.46
CCR9P51686 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCR9P51686 SMG8-203ENST00000578922 2178 ntBASIC17.91■□□□□ 0.46
CCR9P51686 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCR9P51686 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCR9P51686 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CCR9P51686 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.91■□□□□ 0.46
CCR9P51686 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCR9P51686 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCR9P51686 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCR9P51686 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCR9P51686 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCR9P51686 AC112907.3-201ENST00000577781 2400 ntBASIC17.9■□□□□ 0.46
CCR9P51686 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCR9P51686 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.9■□□□□ 0.46
CCR9P51686 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCR9P51686 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CCR9P51686 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms