Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.75■□□□□ 0.75
RAB28P51157 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.75■□□□□ 0.75
RAB28P51157 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.75■□□□□ 0.75
RAB28P51157 AC069152.1-201ENST00000438030 544 ntBASIC19.75■□□□□ 0.75
RAB28P51157 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB28P51157 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RAB28P51157 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RAB28P51157 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB28P51157 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RAB28P51157 AC133041.1-202ENST00000642053 222 ntBASIC19.75■□□□□ 0.75
RAB28P51157 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB28P51157 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB28P51157 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.75■□□□□ 0.75
RAB28P51157 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB28P51157 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.75■□□□□ 0.75
RAB28P51157 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.75■□□□□ 0.75
RAB28P51157 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.75■□□□□ 0.75
RAB28P51157 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB28P51157 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB28P51157 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.75■□□□□ 0.75
RAB28P51157 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB28P51157 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB28P51157 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RAB28P51157 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB28P51157 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB28P51157 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB28P51157 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB28P51157 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB28P51157 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB28P51157 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB28P51157 KRT8P36-201ENST00000489121 1440 ntBASIC19.74■□□□□ 0.75
RAB28P51157 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAB28P51157 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB28P51157 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB28P51157 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB28P51157 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB28P51157 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
RAB28P51157 FP700111.2-201ENST00000619190 1892 ntBASIC19.73■□□□□ 0.75
RAB28P51157 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB28P51157 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB28P51157 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB28P51157 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB28P51157 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RAB28P51157 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.73■□□□□ 0.75
RAB28P51157 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB28P51157 AC007225.1-201ENST00000566331 1836 ntBASIC19.73■□□□□ 0.75
RAB28P51157 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB28P51157 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB28P51157 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB28P51157 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RAB28P51157 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB28P51157 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB28P51157 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB28P51157 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB28P51157 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB28P51157 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB28P51157 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB28P51157 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB28P51157 DUSP5P2-201ENST00000426873 1033 ntBASIC19.72■□□□□ 0.75
RAB28P51157 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RAB28P51157 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB28P51157 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB28P51157 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.72■□□□□ 0.75
RAB28P51157 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.72■□□□□ 0.75
RAB28P51157 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.72■□□□□ 0.75
RAB28P51157 AC098934.4-201ENST00000564127 592 ntBASIC19.72■□□□□ 0.75
RAB28P51157 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB28P51157 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB28P51157 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RAB28P51157 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RAB28P51157 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RAB28P51157 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB28P51157 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB28P51157 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB28P51157 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB28P51157 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.71■□□□□ 0.75
RAB28P51157 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB28P51157 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB28P51157 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB28P51157 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB28P51157 AC091874.3-201ENST00000512672 1195 ntBASIC19.71■□□□□ 0.75
RAB28P51157 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RAB28P51157 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB28P51157 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB28P51157 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB28P51157 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB28P51157 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB28P51157 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB28P51157 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RAB28P51157 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.7■□□□□ 0.74
RAB28P51157 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB28P51157 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB28P51157 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB28P51157 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB28P51157 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB28P51157 AL121603.2-201ENST00000557373 2117 ntBASIC19.7■□□□□ 0.74
RAB28P51157 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB28P51157 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.7■□□□□ 0.74
RAB28P51157 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB28P51157 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms