Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA4P48058 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.86■□□□□ 0.93
GRIA4P48058 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.86■□□□□ 0.93
GRIA4P48058 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA4P48058 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA4P48058 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.86■□□□□ 0.93
GRIA4P48058 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA4P48058 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.86■□□□□ 0.93
GRIA4P48058 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.86■□□□□ 0.93
GRIA4P48058 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.86■□□□□ 0.93
GRIA4P48058 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA4P48058 AL591742.1-201ENST00000604433 565 ntBASIC20.86■□□□□ 0.93
GRIA4P48058 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.86■□□□□ 0.93
GRIA4P48058 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.86■□□□□ 0.93
GRIA4P48058 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
GRIA4P48058 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
GRIA4P48058 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA4P48058 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA4P48058 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA4P48058 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA4P48058 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA4P48058 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
GRIA4P48058 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
GRIA4P48058 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA4P48058 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA4P48058 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA4P48058 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA4P48058 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA4P48058 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA4P48058 AC091799.1-201ENST00000422823 811 ntBASIC20.85■□□□□ 0.93
GRIA4P48058 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.85■□□□□ 0.93
GRIA4P48058 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.85■□□□□ 0.93
GRIA4P48058 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA4P48058 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.85■□□□□ 0.93
GRIA4P48058 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
GRIA4P48058 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.85■□□□□ 0.93
GRIA4P48058 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
GRIA4P48058 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA4P48058 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA4P48058 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA4P48058 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA4P48058 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
GRIA4P48058 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.84■□□□□ 0.93
GRIA4P48058 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA4P48058 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA4P48058 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA4P48058 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA4P48058 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA4P48058 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.84■□□□□ 0.93
GRIA4P48058 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.84■□□□□ 0.93
GRIA4P48058 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.84■□□□□ 0.93
GRIA4P48058 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.84■□□□□ 0.93
GRIA4P48058 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.84■□□□□ 0.93
GRIA4P48058 MYC-209ENST00000641252 345 ntBASIC20.84■□□□□ 0.93
GRIA4P48058 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.84■□□□□ 0.93
GRIA4P48058 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA4P48058 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA4P48058 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.84■□□□□ 0.93
GRIA4P48058 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA4P48058 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.84■□□□□ 0.93
GRIA4P48058 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GRIA4P48058 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GRIA4P48058 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
GRIA4P48058 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GRIA4P48058 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.83■□□□□ 0.93
GRIA4P48058 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GRIA4P48058 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
GRIA4P48058 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
GRIA4P48058 AC097658.1-201ENST00000475555 843 ntBASIC20.83■□□□□ 0.93
GRIA4P48058 AC093827.2-201ENST00000512654 315 ntBASIC20.83■□□□□ 0.93
GRIA4P48058 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.83■□□□□ 0.93
GRIA4P48058 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
GRIA4P48058 AC083880.1-201ENST00000608266 535 ntBASIC20.83■□□□□ 0.93
GRIA4P48058 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
GRIA4P48058 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
GRIA4P48058 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
GRIA4P48058 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
GRIA4P48058 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA4P48058 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
GRIA4P48058 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.82■□□□□ 0.92
GRIA4P48058 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
GRIA4P48058 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
GRIA4P48058 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA4P48058 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA4P48058 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA4P48058 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.82■□□□□ 0.92
GRIA4P48058 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.82■□□□□ 0.92
GRIA4P48058 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
GRIA4P48058 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.82■□□□□ 0.92
GRIA4P48058 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.82■□□□□ 0.92
GRIA4P48058 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
GRIA4P48058 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA4P48058 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
GRIA4P48058 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRIA4P48058 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRIA4P48058 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
GRIA4P48058 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRIA4P48058 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.81■□□□□ 0.92
GRIA4P48058 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRIA4P48058 AC010980.2-201ENST00000587099 1412 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms