Protein–RNA interactions for Protein: P47976

CTH1, mRNA decay factor CTH1, yeastyeast

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTH1P47976 YNL010WYNL010W 726 nt3.7□□□□□ -1.82
CTH1P47976 YOL085W-AYOL085W-A 213 nt3.7□□□□□ -1.82
CTH1P47976 SWD3YBR175W 948 nt3.7□□□□□ -1.82
CTH1P47976 OM14YBR230C 405 nt3.7□□□□□ -1.82
CTH1P47976 CHS3YBR023C 3498 nt3.7□□□□□ -1.82
CTH1P47976 ECM25YJL201W 1800 nt3.7□□□□□ -1.82
CTH1P47976 YDR061WYDR061W 1620 nt3.7□□□□□ -1.82
CTH1P47976 HBT1YDL223C 3141 nt3.69□□□□□ -1.82
CTH1P47976 MRP10YDL045W-A 288 nt3.69□□□□□ -1.82
CTH1P47976 HTB2YBL002W 396 nt3.69□□□□□ -1.82
CTH1P47976 LSM2YBL026W 288 nt3.69□□□□□ -1.82
CTH1P47976 YOR072W-AYOR072W-A 249 nt3.69□□□□□ -1.82
CTH1P47976 MDM1YML104C 3384 nt3.69□□□□□ -1.82
CTH1P47976 ROG1YGL144C 2058 nt3.69□□□□□ -1.82
CTH1P47976 SIZ1YDR409W 2715 nt3.68□□□□□ -1.82
CTH1P47976 TIF4631YGR162W 2859 nt3.68□□□□□ -1.82
CTH1P47976 YEL018C-AYEL018C-A 534 nt3.68□□□□□ -1.82
CTH1P47976 YMR326CYMR326C 309 nt3.68□□□□□ -1.82
CTH1P47976 VPS41YDR080W 2979 nt3.67□□□□□ -1.82
CTH1P47976 MSH4YFL003C 2637 nt3.67□□□□□ -1.82
CTH1P47976 MZM1YDR493W 372 nt3.67□□□□□ -1.82
CTH1P47976 RPL14BYHL001W 417 nt3.67□□□□□ -1.82
CTH1P47976 YJR140W-AYJR140W-A 150 nt3.67□□□□□ -1.82
CTH1P47976 YMR172C-AYMR172C-A 384 nt3.67□□□□□ -1.82
CTH1P47976 NUT2YPR168W 474 nt3.67□□□□□ -1.82
CTH1P47976 ARG2YJL071W 1725 nt3.67□□□□□ -1.82
CTH1P47976 RPS29BYDL061C 171 nt3.66□□□□□ -1.82
CTH1P47976 ARF1YDL192W 546 nt3.66□□□□□ -1.82
CTH1P47976 YLR053CYLR053C 327 nt3.66□□□□□ -1.82
CTH1P47976 REV1YOR346W 2958 nt3.66□□□□□ -1.82
CTH1P47976 NTC20YBR188C 423 nt3.66□□□□□ -1.82
CTH1P47976 LRE1YCL051W 1752 nt3.66□□□□□ -1.82
CTH1P47976 EBS1YDR206W 2655 nt3.66□□□□□ -1.82
CTH1P47976 NAN1YPL126W 2691 nt3.66□□□□□ -1.82
CTH1P47976 REB1YBR049C 2433 nt3.65□□□□□ -1.82
CTH1P47976 RRP5YMR229C 5190 nt3.65□□□□□ -1.82
CTH1P47976 CHO2YGR157W 2610 nt3.65□□□□□ -1.82
CTH1P47976 RPL29YFR032C-A 180 nt3.65□□□□□ -1.83
CTH1P47976 YBR259WYBR259W 2067 nt3.64□□□□□ -1.83
CTH1P47976 BUD5YCR038C 1929 nt3.64□□□□□ -1.83
CTH1P47976 YPL216WYPL216W 3309 nt3.64□□□□□ -1.83
CTH1P47976 YDL176WYDL176W 2127 nt3.64□□□□□ -1.83
CTH1P47976 YDR544CYDR544C 429 nt3.64□□□□□ -1.83
CTH1P47976 CYB5YNL111C 363 nt3.64□□□□□ -1.83
CTH1P47976 RPB11YOL005C 363 nt3.64□□□□□ -1.83
CTH1P47976 SOK2YMR016C 2358 nt3.64□□□□□ -1.83
CTH1P47976 NUP85YJR042W 2235 nt3.64□□□□□ -1.83
CTH1P47976 STU1YBL034C 4542 nt3.64□□□□□ -1.83
CTH1P47976 BEM4YPL161C 1902 nt3.64□□□□□ -1.83
CTH1P47976 UBP1YDL122W 2430 nt3.63□□□□□ -1.83
CTH1P47976 PRM15YMR278W 1869 nt3.63□□□□□ -1.83
CTH1P47976 RPS26BYER131W 360 nt3.63□□□□□ -1.83
CTH1P47976 CUL3YGR003W 2235 nt3.63□□□□□ -1.83
CTH1P47976 NSP1YJL041W 2472 nt3.63□□□□□ -1.83
CTH1P47976 KRE5YOR336W 4098 nt3.62□□□□□ -1.83
CTH1P47976 YDL011CYDL011C 324 nt3.62□□□□□ -1.83
CTH1P47976 TIM8YJR135W-A 264 nt3.62□□□□□ -1.83
CTH1P47976 YKR033CYKR033C 426 nt3.62□□□□□ -1.83
CTH1P47976 TRM7YBR061C 933 nt3.62□□□□□ -1.83
CTH1P47976 YHR078WYHR078W 1659 nt3.62□□□□□ -1.83
CTH1P47976 USE1YGL098W 738 nt3.61□□□□□ -1.83
CTH1P47976 LTP1YPR073C 486 nt3.61□□□□□ -1.83
CTH1P47976 YLL007CYLL007C 1998 nt3.61□□□□□ -1.83
CTH1P47976 SRP68YPL243W 1800 nt3.6□□□□□ -1.83
CTH1P47976 MDM32YOR147W 1869 nt3.6□□□□□ -1.83
CTH1P47976 DPB11YJL090C 2295 nt3.6□□□□□ -1.83
CTH1P47976 YRM1YOR172W 2361 nt3.6□□□□□ -1.83
CTH1P47976 CSR2YPR030W 3366 nt3.6□□□□□ -1.83
CTH1P47976 GCN1YGL195W 8019 nt3.6□□□□□ -1.83
CTH1P47976 TFB5YDR079C-A 219 nt3.6□□□□□ -1.83
CTH1P47976 tF(GAA)QtF(GAA)Q 75 nt3.6□□□□□ -1.83
CTH1P47976 RPS24AYER074W 408 nt3.6□□□□□ -1.83
CTH1P47976 SPI1YER150W 447 nt3.6□□□□□ -1.83
CTH1P47976 RPS22BYLR367W 393 nt3.6□□□□□ -1.83
CTH1P47976 ATP15YPL271W 189 nt3.6□□□□□ -1.83
CTH1P47976 NAT1YDL040C 2565 nt3.6□□□□□ -1.83
CTH1P47976 STE11YLR362W 2154 nt3.6□□□□□ -1.83
CTH1P47976 ATG11YPR049C 3537 nt3.6□□□□□ -1.83
CTH1P47976 HEH2YDR458C 1992 nt3.6□□□□□ -1.83
CTH1P47976 CIN8YEL061C 3003 nt3.6□□□□□ -1.83
CTH1P47976 SSP1YHR184W 1716 nt3.59□□□□□ -1.83
CTH1P47976 ATP25YMR098C 1839 nt3.59□□□□□ -1.83
CTH1P47976 YER091C-AYER091C-A 222 nt3.59□□□□□ -1.83
CTH1P47976 RPS23AYGR118W 438 nt3.59□□□□□ -1.83
CTH1P47976 PEX11YOL147C 711 nt3.59□□□□□ -1.83
CTH1P47976 RDH54YBR073W 2877 nt3.59□□□□□ -1.84
CTH1P47976 BIT61YJL058C 1632 nt3.59□□□□□ -1.84
CTH1P47976 PHO2YDL106C 1680 nt3.59□□□□□ -1.84
CTH1P47976 ERP6YGL002W 651 nt3.58□□□□□ -1.84
CTH1P47976 tW(CCA)G1tW(CCA)G1 72 nt3.58□□□□□ -1.84
CTH1P47976 tW(CCA)G2tW(CCA)G2 72 nt3.58□□□□□ -1.84
CTH1P47976 tW(CCA)JtW(CCA)J 72 nt3.58□□□□□ -1.84
CTH1P47976 tW(CCA)KtW(CCA)K 72 nt3.58□□□□□ -1.84
CTH1P47976 tW(CCA)MtW(CCA)M 72 nt3.58□□□□□ -1.84
CTH1P47976 tW(CCA)PtW(CCA)P 72 nt3.58□□□□□ -1.84
CTH1P47976 SWC7YLR385C 399 nt3.58□□□□□ -1.84
CTH1P47976 IMH1YLR309C 2736 nt3.57□□□□□ -1.84
CTH1P47976 snR60snR60 104 nt3.57□□□□□ -1.84
CTH1P47976 CCT7YJL111W 1653 nt3.57□□□□□ -1.84
CTH1P47976 PDS5YMR076C 3834 nt3.57□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 72.3 ms