Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YDR114CYDR114C 303 nt2.23□□□□□ -2.05
SSN8P47821 YGR050CYGR050C 357 nt2.23□□□□□ -2.05
SSN8P47821 RPL40AYIL148W 387 nt2.23□□□□□ -2.05
SSN8P47821 YJL202CYJL202C 348 nt2.23□□□□□ -2.05
SSN8P47821 NCE101YJL205C 162 nt2.23□□□□□ -2.05
SSN8P47821 DGK1YOR311C 873 nt2.23□□□□□ -2.05
SSN8P47821 RPS12YOR369C 432 nt2.23□□□□□ -2.05
SSN8P47821 VPS64YDR200C 1815 nt2.23□□□□□ -2.05
SSN8P47821 KSP1YHR082C 3090 nt2.23□□□□□ -2.05
SSN8P47821 VPS13YLL040C 9435 nt2.23□□□□□ -2.05
SSN8P47821 IRA2YOL081W 9240 nt2.22□□□□□ -2.05
SSN8P47821 HRD3YLR207W 2502 nt2.22□□□□□ -2.05
SSN8P47821 GPI8YDR331W 1236 nt2.22□□□□□ -2.05
SSN8P47821 AAD16YFL057C 459 nt2.22□□□□□ -2.05
SSN8P47821 ECL1YGR146C 636 nt2.22□□□□□ -2.05
SSN8P47821 RRF1YHR038W 693 nt2.22□□□□□ -2.05
SSN8P47821 YJR140W-AYJR140W-A 150 nt2.22□□□□□ -2.05
SSN8P47821 YLR031WYLR031W 561 nt2.22□□□□□ -2.05
SSN8P47821 YLR154W-EYLR154W-E 204 nt2.22□□□□□ -2.05
SSN8P47821 RPL37AYLR185W 267 nt2.22□□□□□ -2.05
SSN8P47821 YLR406C-AYLR406C-A 150 nt2.22□□□□□ -2.05
SSN8P47821 YMR153C-AYMR153C-A 336 nt2.22□□□□□ -2.05
SSN8P47821 IGO1YNL157W 507 nt2.22□□□□□ -2.05
SSN8P47821 YOL019W-AYOL019W-A 153 nt2.22□□□□□ -2.05
SSN8P47821 YBR209WYBR209W 318 nt2.22□□□□□ -2.05
SSN8P47821 snR54snR54 86 nt2.22□□□□□ -2.05
SSN8P47821 YOL098CYOL098C 3114 nt2.22□□□□□ -2.05
SSN8P47821 AYT1YLL063C 1425 nt2.22□□□□□ -2.05
SSN8P47821 ARP8YOR141C 2646 nt2.21□□□□□ -2.05
SSN8P47821 ECM25YJL201W 1800 nt2.21□□□□□ -2.05
SSN8P47821 RRP12YPL012W 3687 nt2.21□□□□□ -2.06
SSN8P47821 YDR118W-AYDR118W-A 117 nt2.21□□□□□ -2.06
SSN8P47821 PET191YJR034W 327 nt2.21□□□□□ -2.06
SSN8P47821 IRC19YLL033W 693 nt2.21□□□□□ -2.06
SSN8P47821 SEC16YPL085W 6588 nt2.21□□□□□ -2.06
SSN8P47821 NOP14YDL148C 2433 nt2.2□□□□□ -2.06
SSN8P47821 INP51YIL002C 2841 nt2.2□□□□□ -2.06
SSN8P47821 HMRA1YCR097W 381 nt2.2□□□□□ -2.06
SSN8P47821 YER135CYER135C 393 nt2.2□□□□□ -2.06
SSN8P47821 YKL066WYKL066W 444 nt2.2□□□□□ -2.06
SSN8P47821 YLR458WYLR458W 381 nt2.2□□□□□ -2.06
SSN8P47821 YOR105WYOR105W 327 nt2.2□□□□□ -2.06
SSN8P47821 LEE1YPL054W 906 nt2.2□□□□□ -2.06
SSN8P47821 YBR197CYBR197C 654 nt2.2□□□□□ -2.06
SSN8P47821 PDR1YGL013C 3207 nt2.2□□□□□ -2.06
SSN8P47821 LEU3YLR451W 2661 nt2.2□□□□□ -2.06
SSN8P47821 NUP82YJL061W 2142 nt2.2□□□□□ -2.06
SSN8P47821 RGA1YOR127W 3024 nt2.2□□□□□ -2.06
SSN8P47821 SVL3YPL032C 2478 nt2.19□□□□□ -2.06
SSN8P47821 YNL018CYNL018C 1839 nt2.19□□□□□ -2.06
SSN8P47821 AFI1YOR129C 2682 nt2.19□□□□□ -2.06
SSN8P47821 FKS3YMR306W 5358 nt2.19□□□□□ -2.06
SSN8P47821 BRO1YPL084W 2535 nt2.19□□□□□ -2.06
SSN8P47821 PPN1YDR452W 2025 nt2.19□□□□□ -2.06
SSN8P47821 TIM9YEL020W-A 264 nt2.19□□□□□ -2.06
SSN8P47821 AGA2YGL032C 264 nt2.19□□□□□ -2.06
SSN8P47821 YHR125WYHR125W 306 nt2.19□□□□□ -2.06
SSN8P47821 SIP18YMR175W 240 nt2.19□□□□□ -2.06
SSN8P47821 YOR050CYOR050C 348 nt2.19□□□□□ -2.06
SSN8P47821 YOR192C-CYOR192C-C 237 nt2.19□□□□□ -2.06
SSN8P47821 EGD1YPL037C 474 nt2.19□□□□□ -2.06
SSN8P47821 PTP3YER075C 2787 nt2.19□□□□□ -2.06
SSN8P47821 HOS4YIL112W 3252 nt2.18□□□□□ -2.06
SSN8P47821 YDR194W-AYDR194W-A 153 nt2.18□□□□□ -2.06
SSN8P47821 ATP6Q0085 780 nt2.18□□□□□ -2.06
SSN8P47821 YER079WYER079W 633 nt2.18□□□□□ -2.06
SSN8P47821 YER188C-AYER188C-A 300 nt2.18□□□□□ -2.06
SSN8P47821 YGR025WYGR025W 303 nt2.18□□□□□ -2.06
SSN8P47821 NBL1YHR199C-A 222 nt2.18□□□□□ -2.06
SSN8P47821 RAM2YKL019W 951 nt2.18□□□□□ -2.06
SSN8P47821 YLR154W-FYLR154W-F 141 nt2.18□□□□□ -2.06
SSN8P47821 SEN15YMR059W 387 nt2.18□□□□□ -2.06
SSN8P47821 LSM7YNL147W 348 nt2.18□□□□□ -2.06
SSN8P47821 IRC8YJL051W 2469 nt2.17□□□□□ -2.06
SSN8P47821 PSK2YOL045W 3306 nt2.17□□□□□ -2.06
SSN8P47821 YKL111CYKL111C 336 nt2.17□□□□□ -2.06
SSN8P47821 COX7YMR256C 183 nt2.17□□□□□ -2.06
SSN8P47821 SWT1YOR166C 1377 nt2.17□□□□□ -2.06
SSN8P47821 JIP5YPR169W 1479 nt2.17□□□□□ -2.06
SSN8P47821 SSY1YDR160W 2559 nt2.17□□□□□ -2.06
SSN8P47821 PRK1YIL095W 2433 nt2.16□□□□□ -2.06
SSN8P47821 BAS1YKR099W 2436 nt2.16□□□□□ -2.06
SSN8P47821 YER006C-AYER006C-A 318 nt2.16□□□□□ -2.06
SSN8P47821 tT(UGU)Q1tT(UGU)Q1 76 nt2.16□□□□□ -2.06
SSN8P47821 PRE8YML092C 753 nt2.16□□□□□ -2.06
SSN8P47821 YMR324CYMR324C 243 nt2.16□□□□□ -2.06
SSN8P47821 snR13snR13 124 nt2.16□□□□□ -2.06
SSN8P47821 YOR293C-AYOR293C-A 150 nt2.16□□□□□ -2.06
SSN8P47821 YBR032WYBR032W 303 nt2.16□□□□□ -2.06
SSN8P47821 TSC3YBR058C-A 243 nt2.16□□□□□ -2.06
SSN8P47821 YPL276WYPL276W 438 nt2.16□□□□□ -2.06
SSN8P47821 YPR039WYPR039W 336 nt2.16□□□□□ -2.06
SSN8P47821 MGR1YCL044C 1254 nt2.16□□□□□ -2.06
SSN8P47821 RSE1YML049C 4086 nt2.16□□□□□ -2.06
SSN8P47821 HSC82YMR186W 2118 nt2.15□□□□□ -2.06
SSN8P47821 VPS52YDR484W 1926 nt2.15□□□□□ -2.06
SSN8P47821 PRP6YBR055C 2700 nt2.15□□□□□ -2.06
SSN8P47821 DNA2YHR164C 4569 nt2.15□□□□□ -2.07
SSN8P47821 ACB1YGR037C 264 nt2.15□□□□□ -2.07
SSN8P47821 tW(CCA)G1tW(CCA)G1 72 nt2.15□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 57.7 ms