Protein–RNA interactions for Protein: P47013

LCB3, Dihydrosphingosine 1-phosphate phosphatase LCB3, yeastyeast

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB3P47013 UBP11YKR098C 2154 nt2□□□□□ -2.09
LCB3P47013 SWA2YDR320C 2007 nt2□□□□□ -2.09
LCB3P47013 YKL066WYKL066W 444 nt2□□□□□ -2.09
LCB3P47013 SIP18YMR175W 240 nt2□□□□□ -2.09
LCB3P47013 YOR248WYOR248W 303 nt2□□□□□ -2.09
LCB3P47013 snR41snR41 95 nt2□□□□□ -2.09
LCB3P47013 YBR277CYBR277C 402 nt2□□□□□ -2.09
LCB3P47013 RSE1YML049C 4086 nt2□□□□□ -2.09
LCB3P47013 RRP12YPL012W 3687 nt2□□□□□ -2.09
LCB3P47013 NUP82YJL061W 2142 nt2□□□□□ -2.09
LCB3P47013 PTC5YOR090C 1719 nt2□□□□□ -2.09
LCB3P47013 REV1YOR346W 2958 nt1.99□□□□□ -2.09
LCB3P47013 YJL181WYJL181W 1836 nt1.99□□□□□ -2.09
LCB3P47013 YDL032WYDL032W 312 nt1.99□□□□□ -2.09
LCB3P47013 YFH1YDL120W 525 nt1.99□□□□□ -2.09
LCB3P47013 TWF1YGR080W 999 nt1.99□□□□□ -2.09
LCB3P47013 NCE101YJL205C 162 nt1.99□□□□□ -2.09
LCB3P47013 YLR264C-AYLR264C-A 117 nt1.99□□□□□ -2.09
LCB3P47013 LSM7YNL147W 348 nt1.99□□□□□ -2.09
LCB3P47013 YNL324WYNL324W 396 nt1.99□□□□□ -2.09
LCB3P47013 YPL276WYPL276W 438 nt1.99□□□□□ -2.09
LCB3P47013 VPS13YLL040C 9435 nt1.99□□□□□ -2.09
LCB3P47013 YEL043WYEL043W 2871 nt1.99□□□□□ -2.09
LCB3P47013 EDS1YBR033W 2760 nt1.98□□□□□ -2.09
LCB3P47013 PPN1YDR452W 2025 nt1.98□□□□□ -2.09
LCB3P47013 SPF1YEL031W 3648 nt1.98□□□□□ -2.09
LCB3P47013 HMLALPHA2YCL067C 633 nt1.98□□□□□ -2.09
LCB3P47013 MATALPHA2YCR039C 633 nt1.98□□□□□ -2.09
LCB3P47013 YDR194W-AYDR194W-A 153 nt1.98□□□□□ -2.09
LCB3P47013 YER188C-AYER188C-A 300 nt1.98□□□□□ -2.09
LCB3P47013 YGL014C-AYGL014C-A 162 nt1.98□□□□□ -2.09
LCB3P47013 GET1YGL020C 708 nt1.98□□□□□ -2.09
LCB3P47013 tT(UGU)Q1tT(UGU)Q1 76 nt1.98□□□□□ -2.09
LCB3P47013 SHE2YKL130C 741 nt1.98□□□□□ -2.09
LCB3P47013 IRC19YLL033W 693 nt1.98□□□□□ -2.09
LCB3P47013 MLH1YMR167W 2310 nt1.98□□□□□ -2.09
LCB3P47013 YJL016WYJL016W 1686 nt1.98□□□□□ -2.09
LCB3P47013 NCL1YBL024W 2055 nt1.98□□□□□ -2.09
LCB3P47013 VPS64YDR200C 1815 nt1.98□□□□□ -2.09
LCB3P47013 PDR1YGL013C 3207 nt1.97□□□□□ -2.09
LCB3P47013 YDL025W-AYDL025W-A 105 nt1.97□□□□□ -2.09
LCB3P47013 YRB1YDR002W 606 nt1.97□□□□□ -2.09
LCB3P47013 YHR125WYHR125W 306 nt1.97□□□□□ -2.09
LCB3P47013 tW(CCA)G1tW(CCA)G1 72 nt1.97□□□□□ -2.09
LCB3P47013 tW(CCA)G2tW(CCA)G2 72 nt1.97□□□□□ -2.09
LCB3P47013 tW(CCA)JtW(CCA)J 72 nt1.97□□□□□ -2.09
LCB3P47013 tW(CCA)KtW(CCA)K 72 nt1.97□□□□□ -2.09
LCB3P47013 tW(CCA)MtW(CCA)M 72 nt1.97□□□□□ -2.09
LCB3P47013 tW(CCA)PtW(CCA)P 72 nt1.97□□□□□ -2.09
LCB3P47013 YKL063CYKL063C 504 nt1.97□□□□□ -2.09
LCB3P47013 YLR031WYLR031W 561 nt1.97□□□□□ -2.09
LCB3P47013 PRE8YML092C 753 nt1.97□□□□□ -2.09
LCB3P47013 ROX1YPR065W 1107 nt1.97□□□□□ -2.09
LCB3P47013 YPR177CYPR177C 372 nt1.97□□□□□ -2.09
LCB3P47013 YJL070CYJL070C 2667 nt1.97□□□□□ -2.09
LCB3P47013 NAN1YPL126W 2691 nt1.97□□□□□ -2.09
LCB3P47013 MPH1YIR002C 2982 nt1.97□□□□□ -2.09
LCB3P47013 ARP8YOR141C 2646 nt1.97□□□□□ -2.09
LCB3P47013 GDS1YOR355W 1569 nt1.97□□□□□ -2.09
LCB3P47013 GIS1YDR096W 2685 nt1.96□□□□□ -2.1
LCB3P47013 FMP16YDR070C 282 nt1.96□□□□□ -2.1
LCB3P47013 TEN1YLR010C 483 nt1.96□□□□□ -2.1
LCB3P47013 YLR269CYLR269C 351 nt1.96□□□□□ -2.1
LCB3P47013 YMR320WYMR320W 306 nt1.96□□□□□ -2.1
LCB3P47013 YOR055WYOR055W 435 nt1.96□□□□□ -2.1
LCB3P47013 TSC3YBR058C-A 243 nt1.96□□□□□ -2.1
LCB3P47013 MSL5YLR116W 1431 nt1.96□□□□□ -2.1
LCB3P47013 TOF1YNL273W 3717 nt1.95□□□□□ -2.1
LCB3P47013 IPT1YDR072C 1584 nt1.95□□□□□ -2.1
LCB3P47013 YFL019CYFL019C 354 nt1.95□□□□□ -2.1
LCB3P47013 YGR042WYGR042W 816 nt1.95□□□□□ -2.1
LCB3P47013 YHR032W-AYHR032W-A 180 nt1.95□□□□□ -2.1
LCB3P47013 YHR214W-AYHR214W-A 486 nt1.95□□□□□ -2.1
LCB3P47013 AYR1YIL124W 894 nt1.95□□□□□ -2.1
LCB3P47013 YKL165C-AYKL165C-A 234 nt1.95□□□□□ -2.1
LCB3P47013 YKL202WYKL202W 582 nt1.95□□□□□ -2.1
LCB3P47013 YAR068WYAR068W 486 nt1.95□□□□□ -2.1
LCB3P47013 SAS2YMR127C 1017 nt1.95□□□□□ -2.1
LCB3P47013 PEX17YNL214W 600 nt1.95□□□□□ -2.1
LCB3P47013 YOL019W-AYOL019W-A 153 nt1.95□□□□□ -2.1
LCB3P47013 YOR050CYOR050C 348 nt1.95□□□□□ -2.1
LCB3P47013 snR13snR13 124 nt1.95□□□□□ -2.1
LCB3P47013 RPS12YOR369C 432 nt1.95□□□□□ -2.1
LCB3P47013 PRM3YPL192C 402 nt1.95□□□□□ -2.1
LCB3P47013 YPR039WYPR039W 336 nt1.95□□□□□ -2.1
LCB3P47013 DAD3YBR233W-A 285 nt1.95□□□□□ -2.1
LCB3P47013 OSW7YFR039C 1533 nt1.95□□□□□ -2.1
LCB3P47013 YDR186CYDR186C 2634 nt1.95□□□□□ -2.1
LCB3P47013 NUP100YKL068W 2880 nt1.94□□□□□ -2.1
LCB3P47013 VPS52YDR484W 1926 nt1.94□□□□□ -2.1
LCB3P47013 MZM1YDR493W 372 nt1.94□□□□□ -2.1
LCB3P47013 YER006C-AYER006C-A 318 nt1.94□□□□□ -2.1
LCB3P47013 VOA1YGR106C 798 nt1.94□□□□□ -2.1
LCB3P47013 NBL1YHR199C-A 222 nt1.94□□□□□ -2.1
LCB3P47013 YLR101CYLR101C 396 nt1.94□□□□□ -2.1
LCB3P47013 GRX8YLR364W 330 nt1.94□□□□□ -2.1
LCB3P47013 YMR153C-AYMR153C-A 336 nt1.94□□□□□ -2.1
LCB3P47013 YNL010WYNL010W 726 nt1.94□□□□□ -2.1
LCB3P47013 NEW1YPL226W 3591 nt1.94□□□□□ -2.1
LCB3P47013 JIP5YPR169W 1479 nt1.94□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 806.5 ms