Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.3■■□□□ 1
SCNN1AP37088 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.3■■□□□ 1
SCNN1AP37088 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCNN1AP37088 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCNN1AP37088 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SCNN1AP37088 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCNN1AP37088 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.3■■□□□ 1
SCNN1AP37088 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.3■■□□□ 1
SCNN1AP37088 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SCNN1AP37088 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.3■■□□□ 1
SCNN1AP37088 MKRN4P-201ENST00000444706 1521 ntBASIC21.29■■□□□ 1
SCNN1AP37088 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.29■■□□□ 1
SCNN1AP37088 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCNN1AP37088 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCNN1AP37088 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCNN1AP37088 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCNN1AP37088 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.29■■□□□ 1
SCNN1AP37088 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SCNN1AP37088 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SCNN1AP37088 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCNN1AP37088 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SCNN1AP37088 AC083906.2-201ENST00000511578 360 ntBASIC21.29■■□□□ 1
SCNN1AP37088 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.29■■□□□ 1
SCNN1AP37088 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.29■■□□□ 1
SCNN1AP37088 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCNN1AP37088 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCNN1AP37088 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.29■■□□□ 1
SCNN1AP37088 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.29■■□□□ 1
SCNN1AP37088 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SCNN1AP37088 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.29■■□□□ 1
SCNN1AP37088 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCNN1AP37088 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SCNN1AP37088 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCNN1AP37088 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
SCNN1AP37088 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SCNN1AP37088 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SCNN1AP37088 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCNN1AP37088 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCNN1AP37088 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SCNN1AP37088 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SCNN1AP37088 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.28■■□□□ 1
SCNN1AP37088 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCNN1AP37088 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCNN1AP37088 AL355472.2-201ENST00000422958 438 ntBASIC21.28■■□□□ 1
SCNN1AP37088 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SCNN1AP37088 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.28■■□□□ 1
SCNN1AP37088 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCNN1AP37088 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCNN1AP37088 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCNN1AP37088 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.27■■□□□ 1
SCNN1AP37088 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SCNN1AP37088 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.27■■□□□ 1
SCNN1AP37088 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.27■■□□□ 1
SCNN1AP37088 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.27■■□□□ 1
SCNN1AP37088 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.27■■□□□ 1
SCNN1AP37088 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SCNN1AP37088 LINC01521-201ENST00000504184 1943 ntBASIC21.27■■□□□ 1
SCNN1AP37088 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SCNN1AP37088 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SCNN1AP37088 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCNN1AP37088 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCNN1AP37088 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SCNN1AP37088 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCNN1AP37088 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCNN1AP37088 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SCNN1AP37088 GPX1P1-201ENST00000388829 606 ntBASIC21.26■□□□□ 0.99
SCNN1AP37088 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.26■□□□□ 0.99
SCNN1AP37088 GUSBP6-202ENST00000438529 1198 ntBASIC21.26■□□□□ 0.99
SCNN1AP37088 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.26■□□□□ 0.99
SCNN1AP37088 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SCNN1AP37088 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.26■□□□□ 0.99
SCNN1AP37088 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.26■□□□□ 0.99
SCNN1AP37088 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCNN1AP37088 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCNN1AP37088 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.26■□□□□ 0.99
SCNN1AP37088 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.25■□□□□ 0.99
SCNN1AP37088 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SCNN1AP37088 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCNN1AP37088 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCNN1AP37088 KRT17P1-201ENST00000399211 1546 ntBASIC21.25■□□□□ 0.99
SCNN1AP37088 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SCNN1AP37088 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCNN1AP37088 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.25■□□□□ 0.99
SCNN1AP37088 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCNN1AP37088 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCNN1AP37088 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCNN1AP37088 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCNN1AP37088 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SCNN1AP37088 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.25■□□□□ 0.99
SCNN1AP37088 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.25■□□□□ 0.99
SCNN1AP37088 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.25■□□□□ 0.99
SCNN1AP37088 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
SCNN1AP37088 TSPY6P-201ENST00000448518 926 ntBASIC21.25■□□□□ 0.99
SCNN1AP37088 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.25■□□□□ 0.99
SCNN1AP37088 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCNN1AP37088 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.25■□□□□ 0.99
SCNN1AP37088 AC090192.1-201ENST00000517740 490 ntBASIC21.25■□□□□ 0.99
SCNN1AP37088 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.25■□□□□ 0.99
SCNN1AP37088 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.25■□□□□ 0.99
SCNN1AP37088 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms