Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.33■□□□□ 0.68
KRT20P35900 KRT18P11-201ENST00000435214 1283 ntBASIC19.33■□□□□ 0.68
KRT20P35900 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT20P35900 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.33■□□□□ 0.68
KRT20P35900 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT20P35900 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT20P35900 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT20P35900 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT20P35900 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT20P35900 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
KRT20P35900 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT20P35900 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT20P35900 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
KRT20P35900 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.32■□□□□ 0.68
KRT20P35900 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
KRT20P35900 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT20P35900 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT20P35900 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT20P35900 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT20P35900 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.32■□□□□ 0.68
KRT20P35900 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT20P35900 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
KRT20P35900 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT20P35900 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
KRT20P35900 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
KRT20P35900 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT20P35900 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
KRT20P35900 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT20P35900 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KRT20P35900 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT20P35900 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT20P35900 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT20P35900 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KRT20P35900 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT20P35900 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KRT20P35900 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT20P35900 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT20P35900 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT20P35900 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
KRT20P35900 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.31■□□□□ 0.68
KRT20P35900 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KRT20P35900 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT20P35900 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT20P35900 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT20P35900 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT20P35900 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT20P35900 KRT18P61-201ENST00000585825 1298 ntBASIC19.31■□□□□ 0.68
KRT20P35900 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT20P35900 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT20P35900 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KRT20P35900 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT20P35900 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT20P35900 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT20P35900 GABARAPL3-202ENST00000624044 1851 ntBASIC19.31■□□□□ 0.68
KRT20P35900 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT20P35900 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT20P35900 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.3■□□□□ 0.68
KRT20P35900 AP005212.1-201ENST00000581547 1997 ntBASIC19.3■□□□□ 0.68
KRT20P35900 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT20P35900 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT20P35900 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT20P35900 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.3■□□□□ 0.68
KRT20P35900 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT20P35900 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
KRT20P35900 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT20P35900 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT20P35900 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT20P35900 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT20P35900 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT20P35900 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT20P35900 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT20P35900 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
KRT20P35900 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
KRT20P35900 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT20P35900 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
KRT20P35900 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT20P35900 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT20P35900 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT20P35900 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT20P35900 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT20P35900 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT20P35900 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT20P35900 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.29■□□□□ 0.68
KRT20P35900 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT20P35900 AC245052.3-201ENST00000450182 901 ntBASIC19.29■□□□□ 0.68
KRT20P35900 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.29■□□□□ 0.68
KRT20P35900 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
KRT20P35900 SLC7A5P2-201ENST00000553010 536 ntBASIC19.29■□□□□ 0.68
KRT20P35900 UBE2DNL-204ENST00000602536 740 ntBASIC19.29■□□□□ 0.68
KRT20P35900 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT20P35900 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT20P35900 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT20P35900 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT20P35900 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT20P35900 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT20P35900 AL391422.3-201ENST00000603791 2761 ntBASIC19.28■□□□□ 0.68
KRT20P35900 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT20P35900 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT20P35900 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT20P35900 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms