Protein–RNA interactions for Protein: P23968

VMA16, V-type proton ATPase subunit c'', yeastyeast

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA16P23968 SDC1YDR469W 528 nt2.38□□□□□ -2.03
VMA16P23968 YHR138CYHR138C 345 nt2.38□□□□□ -2.03
VMA16P23968 SPC72YAL047C 1869 nt2.38□□□□□ -2.03
VMA16P23968 SHE2YKL130C 741 nt2.38□□□□□ -2.03
VMA16P23968 RPS22BYLR367W 393 nt2.38□□□□□ -2.03
VMA16P23968 ZEO1YOL109W 342 nt2.38□□□□□ -2.03
VMA16P23968 YOL159CYOL159C 516 nt2.38□□□□□ -2.03
VMA16P23968 PTC5YOR090C 1719 nt2.38□□□□□ -2.03
VMA16P23968 YBR277CYBR277C 402 nt2.38□□□□□ -2.03
VMA16P23968 NIC96YFR002W 2520 nt2.38□□□□□ -2.03
VMA16P23968 PSD2YGR170W 3417 nt2.38□□□□□ -2.03
VMA16P23968 YEF3YLR249W 3135 nt2.37□□□□□ -2.03
VMA16P23968 YIL082W-AYIL082W-A 4497 nt2.37□□□□□ -2.03
VMA16P23968 ORC2YBR060C 1863 nt2.37□□□□□ -2.03
VMA16P23968 NCL1YBL024W 2055 nt2.37□□□□□ -2.03
VMA16P23968 PPH3YDR075W 927 nt2.37□□□□□ -2.03
VMA16P23968 YDR269CYDR269C 324 nt2.37□□□□□ -2.03
VMA16P23968 YER087C-AYER087C-A 552 nt2.37□□□□□ -2.03
VMA16P23968 YGL014C-AYGL014C-A 162 nt2.37□□□□□ -2.03
VMA16P23968 VOA1YGR106C 798 nt2.37□□□□□ -2.03
VMA16P23968 YHL005CYHL005C 393 nt2.37□□□□□ -2.03
VMA16P23968 RPS22AYJL190C 393 nt2.37□□□□□ -2.03
VMA16P23968 GRX8YLR364W 330 nt2.37□□□□□ -2.03
VMA16P23968 YMR324CYMR324C 243 nt2.37□□□□□ -2.03
VMA16P23968 STE6YKL209C 3873 nt2.37□□□□□ -2.03
VMA16P23968 YNL018CYNL018C 1839 nt2.36□□□□□ -2.03
VMA16P23968 SRO77YBL106C 3033 nt2.36□□□□□ -2.03
VMA16P23968 ILS1YBL076C 3219 nt2.36□□□□□ -2.03
VMA16P23968 PAU10YDR542W 363 nt2.36□□□□□ -2.03
VMA16P23968 PAU11YGL261C 363 nt2.36□□□□□ -2.03
VMA16P23968 AYR1YIL124W 894 nt2.36□□□□□ -2.03
VMA16P23968 PAU4YLR461W 363 nt2.36□□□□□ -2.03
VMA16P23968 UBC7YMR022W 498 nt2.36□□□□□ -2.03
VMA16P23968 SNX41YDR425W 1878 nt2.36□□□□□ -2.03
VMA16P23968 FAR11YNL127W 2862 nt2.36□□□□□ -2.03
VMA16P23968 TLC1TLC1 1301 nt2.36□□□□□ -2.03
VMA16P23968 CDC24YAL041W 2565 nt2.36□□□□□ -2.03
VMA16P23968 SNU114YKL173W 3027 nt2.35□□□□□ -2.03
VMA16P23968 snR56snR56 88 nt2.35□□□□□ -2.03
VMA16P23968 tQ(UUG)BtQ(UUG)B 72 nt2.35□□□□□ -2.03
VMA16P23968 APC9YLR102C 798 nt2.35□□□□□ -2.03
VMA16P23968 RPS29AYLR388W 171 nt2.35□□□□□ -2.03
VMA16P23968 YOR192C-CYOR192C-C 237 nt2.35□□□□□ -2.03
VMA16P23968 IRC10YOL015W 1761 nt2.35□□□□□ -2.03
VMA16P23968 RRP12YPL012W 3687 nt2.34□□□□□ -2.03
VMA16P23968 YEL043WYEL043W 2871 nt2.34□□□□□ -2.03
VMA16P23968 FMP16YDR070C 282 nt2.34□□□□□ -2.03
VMA16P23968 MZM1YDR493W 372 nt2.34□□□□□ -2.03
VMA16P23968 YOR293C-AYOR293C-A 150 nt2.34□□□□□ -2.03
VMA16P23968 EGD1YPL037C 474 nt2.34□□□□□ -2.03
VMA16P23968 YPR170W-AYPR170W-A 186 nt2.34□□□□□ -2.03
VMA16P23968 MSL5YLR116W 1431 nt2.34□□□□□ -2.04
VMA16P23968 MKT1YNL085W 2493 nt2.33□□□□□ -2.04
VMA16P23968 MLH1YMR167W 2310 nt2.33□□□□□ -2.04
VMA16P23968 GIN4YDR507C 3429 nt2.33□□□□□ -2.04
VMA16P23968 COX1Q0045 1605 nt2.33□□□□□ -2.04
VMA16P23968 SWF1YDR126W 1011 nt2.33□□□□□ -2.04
VMA16P23968 SMD1YGR074W 441 nt2.33□□□□□ -2.04
VMA16P23968 TWF1YGR080W 999 nt2.33□□□□□ -2.04
VMA16P23968 NOP10YHR072W-A 177 nt2.33□□□□□ -2.04
VMA16P23968 YML084WYML084W 309 nt2.33□□□□□ -2.04
VMA16P23968 OSW7YFR039C 1533 nt2.32□□□□□ -2.04
VMA16P23968 BFA1YJR053W 1725 nt2.32□□□□□ -2.04
VMA16P23968 SDH7YDR511W 402 nt2.32□□□□□ -2.04
VMA16P23968 YER121WYER121W 345 nt2.32□□□□□ -2.04
VMA16P23968 RPL6AYML073C 531 nt2.32□□□□□ -2.04
VMA16P23968 YMR320WYMR320W 306 nt2.32□□□□□ -2.04
VMA16P23968 YNL010WYNL010W 726 nt2.32□□□□□ -2.04
VMA16P23968 snR42snR42 351 nt2.32□□□□□ -2.04
VMA16P23968 RTT10YPL183C 3042 nt2.32□□□□□ -2.04
VMA16P23968 TRS130YMR218C 3309 nt2.32□□□□□ -2.04
VMA16P23968 VPS35YJL154C 2835 nt2.31□□□□□ -2.04
VMA16P23968 snR79snR79 84 nt2.31□□□□□ -2.04
VMA16P23968 YKL066WYKL066W 444 nt2.31□□□□□ -2.04
VMA16P23968 SEC22YLR268W 645 nt2.31□□□□□ -2.04
VMA16P23968 YLR334CYLR334C 381 nt2.31□□□□□ -2.04
VMA16P23968 MRPL50YNR022C 420 nt2.31□□□□□ -2.04
VMA16P23968 YOR073W-AYOR073W-A 234 nt2.31□□□□□ -2.04
VMA16P23968 YBR285WYBR285W 435 nt2.31□□□□□ -2.04
VMA16P23968 BCK1YJL095W 4437 nt2.31□□□□□ -2.04
VMA16P23968 YHR078WYHR078W 1659 nt2.31□□□□□ -2.04
VMA16P23968 YSW1YBR148W 1830 nt2.31□□□□□ -2.04
VMA16P23968 KRE33YNL132W 3171 nt2.31□□□□□ -2.04
VMA16P23968 SWA2YDR320C 2007 nt2.3□□□□□ -2.04
VMA16P23968 MSB2YGR014W 3921 nt2.3□□□□□ -2.04
VMA16P23968 SPF1YEL031W 3648 nt2.3□□□□□ -2.04
VMA16P23968 YGL063C-AYGL063C-A 150 nt2.3□□□□□ -2.04
VMA16P23968 YGR121W-AYGR121W-A 216 nt2.3□□□□□ -2.04
VMA16P23968 TMA22YJR014W 597 nt2.3□□□□□ -2.04
VMA16P23968 YKR033CYKR033C 426 nt2.3□□□□□ -2.04
VMA16P23968 RTC6YPL183W-A 282 nt2.3□□□□□ -2.04
VMA16P23968 RIF1YBR275C 5751 nt2.3□□□□□ -2.04
VMA16P23968 NMD2YHR077C 3270 nt2.3□□□□□ -2.04
VMA16P23968 NEW1YPL226W 3591 nt2.29□□□□□ -2.04
VMA16P23968 GIS1YDR096W 2685 nt2.29□□□□□ -2.04
VMA16P23968 CBS1YDL069C 690 nt2.29□□□□□ -2.04
VMA16P23968 RPS24BYIL069C 408 nt2.29□□□□□ -2.04
VMA16P23968 YIL174WYIL174W 228 nt2.29□□□□□ -2.04
VMA16P23968 YJL222W-AYJL222W-A 228 nt2.29□□□□□ -2.04
VMA16P23968 RPS18BYML026C 441 nt2.29□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms