Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.3■■□□□ 1
HMGA1P17096 POM121L13P-201ENST00000422362 380 ntBASIC21.3■■□□□ 1
HMGA1P17096 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.3■■□□□ 1
HMGA1P17096 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.3■■□□□ 1
HMGA1P17096 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGA1P17096 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
HMGA1P17096 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.3■■□□□ 1
HMGA1P17096 AC005829.2-201ENST00000571422 1056 ntBASIC21.3■■□□□ 1
HMGA1P17096 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
HMGA1P17096 MIR2861-201ENST00000636310 90 ntBASIC21.3■■□□□ 1
HMGA1P17096 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.3■■□□□ 1
HMGA1P17096 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGA1P17096 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HMGA1P17096 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
HMGA1P17096 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
HMGA1P17096 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
HMGA1P17096 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGA1P17096 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.29■■□□□ 1
HMGA1P17096 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
HMGA1P17096 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.29■■□□□ 1
HMGA1P17096 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGA1P17096 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HMGA1P17096 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HMGA1P17096 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGA1P17096 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HMGA1P17096 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HMGA1P17096 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGA1P17096 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.29■■□□□ 1
HMGA1P17096 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.29■■□□□ 1
HMGA1P17096 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.29■■□□□ 1
HMGA1P17096 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.29■■□□□ 1
HMGA1P17096 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
HMGA1P17096 AC121338.2-201ENST00000622535 1744 ntBASIC21.29■■□□□ 1
HMGA1P17096 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGA1P17096 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
HMGA1P17096 KRT8P36-201ENST00000489121 1440 ntBASIC21.29■■□□□ 1
HMGA1P17096 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGA1P17096 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
HMGA1P17096 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.28■■□□□ 1
HMGA1P17096 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGA1P17096 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGA1P17096 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.28■■□□□ 1
HMGA1P17096 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.28■■□□□ 1
HMGA1P17096 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
HMGA1P17096 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
HMGA1P17096 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HMGA1P17096 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGA1P17096 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGA1P17096 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
HMGA1P17096 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HMGA1P17096 RPPH1-201ENST00000516869 333 ntBASIC21.28■■□□□ 1
HMGA1P17096 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.28■■□□□ 1
HMGA1P17096 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.28■■□□□ 1
HMGA1P17096 AP006294.2-201ENST00000641667 209 ntBASIC21.28■■□□□ 1
HMGA1P17096 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGA1P17096 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.28■■□□□ 1
HMGA1P17096 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGA1P17096 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGA1P17096 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HMGA1P17096 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
HMGA1P17096 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.27■■□□□ 1
HMGA1P17096 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HMGA1P17096 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.27■■□□□ 1
HMGA1P17096 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
HMGA1P17096 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMGA1P17096 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.27■■□□□ 1
HMGA1P17096 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMGA1P17096 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
HMGA1P17096 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
HMGA1P17096 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
HMGA1P17096 AC006557.6-201ENST00000623071 864 ntBASIC21.27■■□□□ 1
HMGA1P17096 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.27■■□□□ 1
HMGA1P17096 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HMGA1P17096 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HMGA1P17096 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HMGA1P17096 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.27■□□□□ 0.99
HMGA1P17096 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HMGA1P17096 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HMGA1P17096 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 C1QBPP2-201ENST00000528754 825 ntBASIC21.26■□□□□ 0.99
HMGA1P17096 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.26■□□□□ 0.99
HMGA1P17096 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.26■□□□□ 0.99
HMGA1P17096 AC120498.8-201ENST00000614275 531 ntBASIC21.26■□□□□ 0.99
HMGA1P17096 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
HMGA1P17096 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.26■□□□□ 0.99
HMGA1P17096 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.26■□□□□ 0.99
HMGA1P17096 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA1P17096 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms