Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
CFTRP13569 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC35.43■■■■□ 3.26
CFTRP13569 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC35.43■■■■□ 3.26
CFTRP13569 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC35.43■■■■□ 3.26
CFTRP13569 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC35.43■■■■□ 3.26
CFTRP13569 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC35.43■■■■□ 3.26
CFTRP13569 KRT18P57-201ENST00000443599 1254 ntBASIC35.42■■■■□ 3.26
CFTRP13569 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC35.42■■■■□ 3.26
CFTRP13569 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
CFTRP13569 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
CFTRP13569 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CFTRP13569 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC35.41■■■■□ 3.26
CFTRP13569 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CFTRP13569 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC35.41■■■■□ 3.26
CFTRP13569 RMI2-205ENST00000576027 818 ntTSL 2 BASIC35.41■■■■□ 3.26
CFTRP13569 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CFTRP13569 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC35.41■■■■□ 3.26
CFTRP13569 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC35.41■■■■□ 3.26
CFTRP13569 CRAT-202ENST00000393384 973 ntTSL 2 BASIC35.41■■■■□ 3.26
CFTRP13569 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC35.41■■■■□ 3.26
CFTRP13569 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC35.41■■■■□ 3.26
CFTRP13569 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC35.41■■■■□ 3.26
CFTRP13569 AC073195.1-201ENST00000607241 877 ntBASIC35.41■■■■□ 3.26
CFTRP13569 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC35.4■■■■□ 3.26
CFTRP13569 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
CFTRP13569 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC35.4■■■■□ 3.26
CFTRP13569 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
CFTRP13569 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
CFTRP13569 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC35.4■■■■□ 3.26
CFTRP13569 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC35.4■■■■□ 3.26
CFTRP13569 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC35.4■■■■□ 3.26
CFTRP13569 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC35.4■■■■□ 3.26
CFTRP13569 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC35.39■■■■□ 3.26
CFTRP13569 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CFTRP13569 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CFTRP13569 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CFTRP13569 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CFTRP13569 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC35.39■■■■□ 3.26
CFTRP13569 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC35.39■■■■□ 3.26
CFTRP13569 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CFTRP13569 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
CFTRP13569 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC35.38■■■■□ 3.25
CFTRP13569 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC35.38■■■■□ 3.25
CFTRP13569 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC35.38■■■■□ 3.25
CFTRP13569 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
CFTRP13569 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC35.38■■■■□ 3.25
CFTRP13569 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC35.38■■■■□ 3.25
CFTRP13569 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
CFTRP13569 TREX2-204ENST00000370212 861 ntTSL 5 BASIC35.37■■■■□ 3.25
CFTRP13569 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC35.37■■■■□ 3.25
CFTRP13569 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC35.37■■■■□ 3.25
CFTRP13569 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC35.37■■■■□ 3.25
CFTRP13569 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC35.37■■■■□ 3.25
CFTRP13569 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC35.37■■■■□ 3.25
CFTRP13569 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC35.37■■■■□ 3.25
CFTRP13569 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
CFTRP13569 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC35.37■■■■□ 3.25
CFTRP13569 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC35.37■■■■□ 3.25
CFTRP13569 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC35.37■■■■□ 3.25
CFTRP13569 EXOC3-AS1-202ENST00000623673 1663 ntBASIC35.37■■■■□ 3.25
CFTRP13569 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC35.37■■■■□ 3.25
CFTRP13569 NBPF21P-201ENST00000425093 1451 ntBASIC35.36■■■■□ 3.25
CFTRP13569 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
CFTRP13569 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
CFTRP13569 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC35.36■■■■□ 3.25
CFTRP13569 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC35.36■■■■□ 3.25
CFTRP13569 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC35.36■■■■□ 3.25
CFTRP13569 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
CFTRP13569 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
CFTRP13569 UNC93B2-201ENST00000285383 730 ntBASIC35.35■■■■□ 3.25
CFTRP13569 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
CFTRP13569 AL031963.3-201ENST00000606441 850 ntBASIC35.35■■■■□ 3.25
CFTRP13569 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC35.35■■■■□ 3.25
CFTRP13569 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
CFTRP13569 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC35.35■■■■□ 3.25
CFTRP13569 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC35.35■■■■□ 3.25
CFTRP13569 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC35.35■■■■□ 3.25
CFTRP13569 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
CFTRP13569 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
CFTRP13569 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC35.35■■■■□ 3.25
CFTRP13569 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC35.35■■■■□ 3.25
CFTRP13569 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC35.35■■■■□ 3.25
CFTRP13569 AC010947.1-201ENST00000623454 693 ntBASIC35.35■■■■□ 3.25
CFTRP13569 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC35.35■■■■□ 3.25
CFTRP13569 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC35.35■■■■□ 3.25
CFTRP13569 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC35.34■■■■□ 3.25
CFTRP13569 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
CFTRP13569 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC35.34■■■■□ 3.25
CFTRP13569 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC35.34■■■■□ 3.25
CFTRP13569 CYP2D8P-201ENST00000433633 1490 ntBASIC35.34■■■■□ 3.25
CFTRP13569 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC35.34■■■■□ 3.25
CFTRP13569 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC35.33■■■■□ 3.25
CFTRP13569 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC35.33■■■■□ 3.25
CFTRP13569 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CFTRP13569 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CFTRP13569 F2R-202ENST00000505600 442 ntTSL 2 BASIC35.33■■■■□ 3.25
CFTRP13569 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC35.33■■■■□ 3.25
CFTRP13569 AC124283.5-201ENST00000624661 1809 ntBASIC35.33■■■■□ 3.25
CFTRP13569 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
CFTRP13569 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC35.32■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms